Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00941 ATGATGGAACTCTCTCTATTCCACCATCAGCACCACCCTATGCTTCTTCATTGTCCTCTCAACTCCATTATCTTCACAAGGACACGCAAAAGACTTCACAACAAAAGTTCTTATAGGTTACCATGCCACTGCTCATATCCATCCTCAAATAAAACTGCTGCAGAACCACTCACAGTGTCTTTGCAGATTGAAGAAGGAAGAAGAGCATTACTCAGTTGTCTCCTCACAACTGTAGCTGGATTCTATGCATGTGATGTGGCTGGAGCTGTTAGCACAAGTAGAAGAGCTCTACGAGGAGCTAAAATTCCTGAAAGTGATTACACAACCTTGCCCGATGGTCTGAAGTACTATGATTTGAAGGTTGGGACTGGAGCTGAGGCTGTAAAAGGATCACGTGTCGCAGTTCACTATGTTGCTAAATGGAGGGGTATCACTTTCATGACTAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCCTATGGATTTGATGTAGGCCAATCTGAGAGAGGAACAGTACTTAAAGGGTTGGATATAGGAGTACAAGGCATGCGAGTAGGAGGCCAGCGACTGTTAATTGTTCCTCCTGAACTAGCCTATGGAAAAAAGGGAGTCCAAGAAATCCCTCCAAACGCGACAATAGAGTTGGATGTTGAACTGCTTTCCATCAAACAAAGCCCATATGGGACTGCCGTAAAGGTCGTTGAAGGTTAA 714 0.4496 MMELSLFHHQHHPMLLHCPLNSIIFTRTRKRLHNKSSYRLPCHCSYPSSNKTAAEPLTVSLQIEEGRRALLSCLLTTVAGFYACDVAGAVSTSRRALRGAKIPESDYTTLPDGLKYYDLKVGTGAEAVKGSRVAVHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDIGVQGMRVGGQRLLIVPPELAYGKKGVQEIPPNATIELDVELLSIKQSPYGTAVKVVEG* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00941 237 SUPERFAMILY FKBP-like 101 224 - -
Rops6g00941 237 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 126 221 IPR001179 GO:0003755
Rops6g00941 237 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 130 224 IPR001179 GO:0003755
Rops6g00941 237 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 104 230 - -
Rops6g00941 237 Gene3D - 90 233 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00941 Rops-Chr6 22824879 22829759 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00941 119 223 Calmodulin-binding Proteins AT5G48570 30.909 3.24e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00941 - - gmx:100815603 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00941 6 22824879 22829759 Rops6g00941 6 22824879 22829759 ECH