Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00934 ATGGGGGACAACCGTGAAGACAACAGAACAGAGAGCAGCGATTTCACTTCCGAGGACGAGGGGACCGAGGATTACCGACGCGGTGGCTACCACGCTGTCCGAATCGGTGACACCTTCAAAGCCGGTCGCTATGTCGTTCAGAGCAAGCTTGGTTGGGGCCATTTCTCCACTGTTTGGCTCGCTTGGGATACCCATCATTCTAGATACGTGGCTTTGAAAGTTCAAAAGAGTGCTCAGCATTACACTGAGGCAGCTATGGATGAGATAACGATCTTGCAGCAGATTGCAGAGGGAGACCCTAACGATAAAAAATGTGTGGTTAAGCTTTTGGACCATTTCAAGCATTCTGGTCCAAATGGACAGCATGTTTGTATGGTGTTTGAGTATCTTGGAGATAATCTCTTGACTCTTATTAAGTATACCGATTATCGGGGAATGCCGATTAACATGGTTAAAGAGATATGCTTTCATATTCTTGTTGGATTGGATTACTTACATAAGCAACTTTCTATCATACATACTGACTTGAAACCTGAAAACATCCTCCTCTTGTCAATGATAGATCCGTCTAAGGATCCTAGAAAGTCTGGTGCCCCTCTTGTTCTTCCTAGTACTAAGGACAAGGCAGTGCTGGAGTCAGCAGCAGCAAAAGACACGAAATCGGTGAATGGGGATTTGATTAAGAATCATAAGAAAAAGATTAAGAGAAAAGCTAAGCAAGCAGCTCATGGATGTGTTGAGAAGGAAGCTTCTGAAGGAATTGAGGGTAATCCTGAAACCTCTGGTGCTATAGAGTCATCTCCAAATGTGAGTTCTTCAAGAGAACAAGCTTCTAGTTCTGCAGGCACTAGTAGGTTATCAGATGCTGATGGAACTAAGTCAAAAGAGCAGGGCAACAAAAGAGGAAGCCGCTCAATGAGACAGAAACTGCTGGCTTCAGTTGATCTCAAGTGCAAGTTAGTTGACTTTGGTAATGCTTGCTGGACATATAAACAGTTTACAAATGATATCCAAACAAGACAATATCGGTGCCCAGAGGTTATCCTTGGATCAAAATATTCTACATCCGCAGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCTACTGGAGATGTTTTATTTGATCCTCACAGTGGTGACAACTTTGACAGGGATGAGGACCACTTAGCATTAATGATGGAACTTCTTGGAATGATGCCACGTAAGATTGCACTAGGGGGCCGTTATTCCCGTGATTTCTTTAACAGATATGGTGATTTGAGGCACATTCGTCGGTTGCGATTCTGGCCCATGAATAAAGTCCTCATGGAGAAATATGATTTTAGTGAGCAAGATGCAAATGCCATGACTGACTTTTTGGTTCCTATCCTTGACTTTGTTCCCGAGAAACGGCCTACGGCTGGTCAGTGCCTGCAACATCCATGGATCAATGTAGGTCCACATCGTTTGGAGCCATCCACACGGTCTTCTAATCACAACCCTGCTACTGAAACTGCTATTTCTGACCAGAAGAAAAGGGACAAAGATGAGAGGGAGGCCATGGAGGCAGGAATTGGAAATATTGCTATCAATTCAGATTCTAAACCACTCATGCATTCTCCGTCTAAGAAAGCCTTCCAAAGCAGCCACAAGTAG 1641 0.4394 MGDNREDNRTESSDFTSEDEGTEDYRRGGYHAVRIGDTFKAGRYVVQSKLGWGHFSTVWLAWDTHHSRYVALKVQKSAQHYTEAAMDEITILQQIAEGDPNDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYRGMPINMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGAPLVLPSTKDKAVLESAAAKDTKSVNGDLIKNHKKKIKRKAKQAAHGCVEKEASEGIEGNPETSGAIESSPNVSSSREQASSSAGTSRLSDADGTKSKEQGNKRGSRSMRQKLLASVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPMNKVLMEKYDFSEQDANAMTDFLVPILDFVPEKRPTAGQCLQHPWINVGPHRLEPSTRSSNHNPATETAISDQKKRDKDEREAMEAGIGNIAINSDSKPLMHSPSKKAFQSSHK* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00934 546 SUPERFAMILY Protein kinase-like (PK-like) 39 485 IPR011009 -
Rops6g00934 546 MobiDBLite consensus disorder prediction 483 546 - -
Rops6g00934 546 Pfam Protein kinase domain 44 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00934 546 Pfam Protein kinase domain 311 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00934 546 FunFam Serine/threonine-protein kinase SRPK-like protein 308 478 - -
Rops6g00934 546 MobiDBLite consensus disorder prediction 289 303 - -
Rops6g00934 546 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Rops6g00934 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Rops6g00934 546 MobiDBLite consensus disorder prediction 1 23 - -
Rops6g00934 546 MobiDBLite consensus disorder prediction 501 517 - -
Rops6g00934 546 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 11 503 - -
Rops6g00934 546 ProSiteProfiles Protein kinase domain profile. 44 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00934 546 MobiDBLite consensus disorder prediction 528 546 - -
Rops6g00934 546 Gene3D Transferase(Phosphotransferase) domain 1 127 479 - -
Rops6g00934 546 SMART serkin_6 44 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00934 546 MobiDBLite consensus disorder prediction 227 306 - -
Rops6g00934 546 MobiDBLite consensus disorder prediction 485 500 - -
Rops6g00934 546 MobiDBLite consensus disorder prediction 260 288 - -
Rops6g00934 546 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Rops6g00934 546 CDD STKc_SRPK 33 478 - -
Rops6g00934 546 MobiDBLite consensus disorder prediction 240 254 - -
Rops6g00934 546 FunFam CMGC/SRPK protein kinase 30 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00934 Rops-Chr6 22764606 22773157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00934 1 530 EF-hand Containing Proteins AT5G22840 70.037 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Rops6g00934 Pkinase 1.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00934 K08832 - gmx:100810777 991.104