Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00930 ATGGAAGGCAATGGATTAAGTAGTGGAATGTTTTCTAGCATCAGTTCTGGATTGCTAGGAGTAGAAAACCCTTTACAACAACAACAACAACAAAATCTCACAAATCAGCAAAATCCTCATCATTTGCACCATCCCCAAGTGGTTTCTTATGCTCCTCCCCACCATGACACTGATACACACCAACAACAGCTACAGCAATCAATTAAACTTGGGTACCCTTCTTATTCAGCCAAGAACAAGCAACAACAAAGTTCGTTGAGTGATGAGGACGAACCTGGGTTCCCAGCTGATGAGAGTTCTGGGGACCCTAAGAGGAAGCTTTCACCTTGGCAGAGAATGAAGTGGACTGATACCATGGTTAGGCTCTTGATAATGGCGGTTTATTACATTGGTGATGAAGCTGGTTCAGAAGGGACTGATCCAACGGGGAAGAAGAAGTCCACTGGTTTGTTGCAGAAGAAAGGGAAGTGGAAATCAGTGTCAAGGGCTATGATGGAAAAAGGGTTCTACGTGTCTCCTCAGCAATGTGAGGATAAGTTCAATGACTTGAATAAGAGGTACAAGAGAGTGAATGATATACTTGGAAAGGGAACAGCTTGTAGGGTGGTGGAAAATCAGAGCTTGTTGGATACAATGGACTTGTCACCAAAGATGAAAGAGGAGGTGAAGAAGCTGCTCAATTCCAAGCACCTTTTCTTCAGGGAAATGTGTGCTTATCATAATAGTTGTGGTCATGGGACCTCTAATGTTCCACAACAAGTAGAGGGTGGAACACCTCAGGCTCAACAACCACAACAGCAGCAGCAACAACAACAACAGCGTTGTTTTCATTCATCAGAGACTGGGGTGGTTAATTTGGGAGGGTCAGGGGCAGAGGGTTTGAGGATGTTGAAAGTGGGGAGTGGGGAGGAGGATGATGATGAGGATGAGGATGATGAATCAGAGGACTCTTCTGATGAGGATGAAGATGAATCAGCAGAAGGTGGTTCTAGGGGTCAAGTTGGGCATGGACATGAAGATGAGGATGAGAATGATGGAAGGTCATCAAGGAAAAGGTCAAGGAAAACACTAGGGTTTTCTATGTCATCCCATTTGATGCAACAACTGAACAGTGAGGTCGCTGGTGTGTTCCAAGATGGGGGTAGGAGTCCTTGGGAGAAAAAGCAATGGATGAGGAGTAGGATAATGCAATTGGAGGAGCAGCAAATAAGTTATCAAACTCAAGCATTTGAGCTGGAAAAGCAAAGGTTGAAATGGGCAAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGAGAGCTAAACTTGAAAATGAACGTAGAAGGCTAGAAAATGAGAGAATGGTTTTGCTCATTCGTCAGAAGGAGCTTGAATTGCTGAATCTTCAACACCAACAGCAGCAGCAGCAACAACAACAGCAACATTCTTCCACCTAG 1434 0.4449 MEGNGLSSGMFSSISSGLLGVENPLQQQQQQNLTNQQNPHHLHHPQVVSYAPPHHDTDTHQQQLQQSIKLGYPSYSAKNKQQQSSLSDEDEPGFPADESSGDPKRKLSPWQRMKWTDTMVRLLIMAVYYIGDEAGSEGTDPTGKKKSTGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQSLLDTMDLSPKMKEEVKKLLNSKHLFFREMCAYHNSCGHGTSNVPQQVEGGTPQAQQPQQQQQQQQQRCFHSSETGVVNLGGSGAEGLRMLKVGSGEEDDDEDEDDESEDSSDEDEDESAEGGSRGQVGHGHEDEDENDGRSSRKRSRKTLGFSMSSHLMQQLNSEVAGVFQDGGRSPWEKKQWMRSRIMQLEEQQISYQTQAFELEKQRLKWARFSSKKEREMERAKLENERRRLENERMVLLIRQKELELLNLQHQQQQQQQQQQHSST* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00930 477 Gene3D - 115 189 - -
Rops6g00930 477 MobiDBLite consensus disorder prediction 327 352 - -
Rops6g00930 477 MobiDBLite consensus disorder prediction 248 285 - -
Rops6g00930 477 Pfam Myb/SANT-like DNA-binding domain 112 238 IPR044822 -
Rops6g00930 477 Coils Coil 395 415 - -
Rops6g00930 477 MobiDBLite consensus disorder prediction 1 43 - -
Rops6g00930 477 MobiDBLite consensus disorder prediction 1 107 - -
Rops6g00930 477 PANTHER F16F4.11 PROTEIN-RELATED 1 461 - -
Rops6g00930 477 MobiDBLite consensus disorder prediction 248 353 - -
Rops6g00930 477 MobiDBLite consensus disorder prediction 55 89 - -
Rops6g00930 477 Coils Coil 423 471 - -
Rops6g00930 477 MobiDBLite consensus disorder prediction 303 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00930 Rops-Chr6 22703429 22704862 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Rops6g00930 Myb_DNA-bind_4 8.2e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00930 - - gmx:100816661 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00930 6 22703429 22704862 Rops6g00930 6 22703429 22704862 ECH
Rops8g03420 8 73270747 73272072 Rops6g00930 6 22703429 22704862 PCT