Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00925 ATGGCTTGCATGTGGCGCAAGAATGCCCATGGTGGCAGTGGGAAGAAACCACCACCGGATGTGCCGCGAGGTCACGTGGCAGTGATTGTGGGAGAAGCAAACAAGAGGTTTGTGATAAGAGCTGATTACCTGAACCATCCATTGCTTCAACAACTGCTAGACCAGGCATATGAAGGCTATGGCTTCAACAAGAGTGGTCCTCTGGCCATACCTTGTGATGAGATCCTATTTGAAGATATTCTTCATTCCCTTAGAGGTGGAACACACACTCGCCGTTCCTCTTCCCATGTGCCTACCAAAGAGCTAGATTTAAGCTTATCCAAAGACTCCGTACCTCTACTTCAAGGCTTTGATAGCAAAAGGAGGAGCAACAACTATAAGCACTAA 387 0.4755 MACMWRKNAHGGSGKKPPPDVPRGHVAVIVGEANKRFVIRADYLNHPLLQQLLDQAYEGYGFNKSGPLAIPCDEILFEDILHSLRGGTHTRRSSSHVPTKELDLSLSKDSVPLLQGFDSKRRSNNYKH* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00925 128 Pfam Auxin responsive protein 15 84 IPR003676 GO:0009733
Rops6g00925 128 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 13 80 IPR003676 GO:0009733
Rops6g00925 128 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00925 Rops-Chr6 22618571 22618957 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00925 1 120 Calmodulin-binding Proteins AT4G34750 44.697 9.76e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00925 K14488 - gmx:100777611 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00925 6 22618571 22618957 Rops6g00925 6 22618571 22618957 ECH