Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00911 ATGGAAATGCCTTCTAGAAGATCCAATTACTCGCTTCTCAGCCAAGTTCCCGATGACCAATTCCCCGGCACCTCCGGAACCACCGCGCCGTCGTCTTCCGGTGACGGGAAAGCAAGTCGAGGCGGCAAGATGGACCGAGGCTTCGATTGGGAGTTAGTTGGCGATCACAGGTCGGCGCATCAAGGGAACAATCGGATCGGGAATTTGCACTCTTCGATCGGTTTGCAGAGGCAATCGAGCGGCAGCAGTTTCGGCGAAAGCTCAATATCCGGCGGCGGAGAGTATTATGCTCCGACGCTGTCGACGCCGGCGGCGAGTGAGGTCGATACCTTCGGATACTTGCACGACGAGGGATTTAAGGTTGGTGAGGTGAGGAGCAAGTTGACGTCGGAGGTTCCGTCGAGGAACACTGGCGGTTCCTCCGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTACCAGTTGCAGCTCGCTTTGGCGTTACGGTTATCGTCGGACGCCACTTGCGCTGACGATCCCAATTTCCTGGATCCGGTGCCGGATGAATCCGTTTTGAGGATGTCGACTTCGCCGGAGGCGGTGTCGCATAGATTCTGGGTGAATGGCTGCTTATCATACTCCGACAAAATTCCCGATGGCTTTTACATGATTCATGGGATGGATTCCTATGTCTGGACTGTGTGCACTGATCAGCAGGAAAATGGCCGAGTTCCATCAGTTGATACACTAAAGTCTGTAGATCCCTGCATCGATTCTTCACTTGAAGTAGTTTTGGTGGATCGACGCAGTGACCCCAGCTTAAGAGATCTGCAAAACAGAGTTCATAGCATTTCTTGTAGCAGCCTAACAACAACAGAGGTTGTAGATCAGCTTTCCAAGCTGGTTTGCAACCGTATGGGGGGTTCAGCTTCTGTGGGGGAAGATGACTTTGTTTCTATCTGGAGGGATTGCAGTAATGATCTGAAAGATTGCTTAGGATCTGTTGTTGTTCCCATAGGTAGTCTATCTATTGGCCTGTGCAGGCATCGTGCTATATTATTCAAAGTACTAGCCGATGCCATTGATTTACCTTGTCGGATTGCACGGGGATGTAAATATTGCAAAAGGGATGATGCTTCATCTTGTCTTGTTCGGTTTGGGCTTGAGAGGGAATATCTTGTTGATTTAGTTGGGAAGCCAGGACACTTATGCGAGCCTGATTCCTTGCTCAACGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCAAGACATAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAAAAATATTTCTCAGACTGTCTGTCTCTTGAGCTTGTCTTCGACAATAGTTCTGCAGAACAGTTTGATGGGAAATCCAATGACATGAATAACCATGGGCCAATATTAAATGACGGCAACATAAGTTCTCACTTTCCTCTGCATCCACAAGCTTCTCATCCAAGCACGCGTGATCAAGGTTCTGAAACATACATGTCGTGTAACCCTCCTCAGAACATTATAGATTCAACAACTGTGGGCAAGTATCCACCGCCTTTAAAGCATAAGCGTCCTGTTGGTATACAAACCCCGTTAGCACTACCAAATGCCAATGATGATGTGATTGAGAAAAGGAGGGTCGTTGAAGGAAGTCAACTGATTCCTAGCATACCAACCCGAGAGACTGCCCTTGACCTGGAGGATTTTGACATATCATGGAGTGATCTTGTGTTAAGAGAGAAAATAGGATCAGGTTCTTTTGGAACTGTACATCGTGCTGAGTGGCATGGCTCGGATGTTGCTGTGAAAATTTTGATGGAACAAGATTTTCATGCTGAACGGTTCAAGGAATTCCTGAGGGAGGTTGCAATAATGAAACGTATGCGGCATCCAAACATTGTTTTGTTTATGGGGGCAGTCACTCAACCTCCTAACTTATCAATTGTCACTGAATATTTATCAAGGGGTAGCTTATATAGGTTGTTGCATAGACCTGGTGCCAAAGAGGTGTTGGATGAGAGGCGCAGGCTTGGTATGGCTTATGATGTGGCAAAGGGGATGAATTATCTTCATAAACGTAATCCCCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTAGTTGACAAGAAATATACAGTGAAGGTTTGTGATTTTGGGCTTTCCCGTCTAAAGGCCAATACATTTCTCTCATCCAAGTCAGCTGCTGGAACTCCTGAGTGGATGGCTCCAGAAGTTCTTCGTGATGAGCCATCAAATGAGAAGTCTGATGTATACAGCTTTGGTGTAATCTTGTGGGAGATTGCTACGTTGCAACAGCCATGGGGTAATTTGAATCCGCCACAGGTTGTGGCAGCTGTTGGCTTTAAGGGAAAAAGGCTTGAGATCCCACGTGATGTGAATCCCCAAGTAGCTGCAATAATTGAGTCTTGCTGGGCCGATGAGCCCTGGAAACGCCCTTCTTTTTCCAGTATTATGGATTCTTTGAGGCAGTTGCTCAAACCCCCTACTCCTCAACCTGGATTACACCGTTTTAGTCGTCGTAGAGTCCAGTTGTATATTTCTTGTCTAATTCAGGGATTCCGCAAGATTGACACTGACAAATGGGAGTTTTTTAATGAAGCTTTCCAGCGAGGGAAGAGGCACTTATTGAAGAACATCCAAAGGCGAAGGTCACCTACATCTCAACAAGTTGGTAGCTATGTTGGATCTTCTTCTGATGCAGGGAAGTCTGGAGTTGAGGTTGAGATAGAAAAACTGAGGAAGGAGAGGAGTATGCTGATGCAAGAGGTGGTTGATTTGCAGCAACAACAGCGAAGAACGGTTCACCATGCAGGAGAAGTGAATCAAAGGCTCCAATCTGCAGAGCAGAGGCAAAAACAAATGGTTTCTTTCTTGGCAAAGTTATTTCAAAATCCAGACTTTTTAGCCCGCCTTAAGCAGAAGAAGGAACAGAGAGAGATAGATTCTCCAAGAGTGAGAAGGAAGTTTGTTAAGCAGCACCAACATGAAACAGGAATAGCAGAAACTCTCAAAGAAGGGCAGATAGTGAGGTACCAACCCGATTGGAGAAATATAACAATGTCTTCTGAAACTCCAGAACTAAGTCCAGTTTCCATTGAACAGTCTCCTCACTACCTTTCACAGGATTTGGCAACAGAAATGAGTGTAGGTGCAGAAGATCTGACTTCTCAAATGGAGAATATTGCATCAGCAGATGAATTGGCTGCAATGCATGGAATTATGCCAACTCAAGAAATCATTGGAGAAGGATCGTCTAGCTTTGAACTTGAAGATTCCCTTTTCAAAGGGAAAAATGTCATGATCCCAAATCAAGAATTTCTTCCTGAGTACTTTGTTTCCTTTCCTGAGGTTTTGCACAAGGAGAATGGCTTTCCAGAGTTTTCACCTCTTGGAACTGAAAGCATGATCAAACAAGAAGATATATGGGACCCCAACTTCAATGTTAGTGTTGCTACTTCAAGCAGTGGGGATGAACTGTGGGGCAATCCTATCAACTATGGAGTTCCAGAATTTGGAGTCACAAGTGGTATATCAGAATCAGACATCTGGGATATTGGCTTAGAAAGTTTGGGCATTGATAAGTGGCCAGCTGATGAATCTGTTCTTGATGAAACAGATAGTCAAGCTGGTCAGCCAAAAGATGATAGACATTAG 3678 0.4568 MEMPSRRSNYSLLSQVPDDQFPGTSGTTAPSSSGDGKASRGGKMDRGFDWELVGDHRSAHQGNNRIGNLHSSIGLQRQSSGSSFGESSISGGGEYYAPTLSTPAASEVDTFGYLHDEGFKVGEVRSKLTSEVPSRNTGGSSGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPVPDESVLRMSTSPEAVSHRFWVNGCLSYSDKIPDGFYMIHGMDSYVWTVCTDQQENGRVPSVDTLKSVDPCIDSSLEVVLVDRRSDPSLRDLQNRVHSISCSSLTTTEVVDQLSKLVCNRMGGSASVGEDDFVSIWRDCSNDLKDCLGSVVVPIGSLSIGLCRHRAILFKVLADAIDLPCRIARGCKYCKRDDASSCLVRFGLEREYLVDLVGKPGHLCEPDSLLNGPSSISFSSPLRFPRHKPAEPTIDFRSLAKKYFSDCLSLELVFDNSSAEQFDGKSNDMNNHGPILNDGNISSHFPLHPQASHPSTRDQGSETYMSCNPPQNIIDSTTVGKYPPPLKHKRPVGIQTPLALPNANDDVIEKRRVVEGSQLIPSIPTRETALDLEDFDISWSDLVLREKIGSGSFGTVHRAEWHGSDVAVKILMEQDFHAERFKEFLREVAIMKRMRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHRPGAKEVLDERRRLGMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEIATLQQPWGNLNPPQVVAAVGFKGKRLEIPRDVNPQVAAIIESCWADEPWKRPSFSSIMDSLRQLLKPPTPQPGLHRFSRRRVQLYISCLIQGFRKIDTDKWEFFNEAFQRGKRHLLKNIQRRRSPTSQQVGSYVGSSSDAGKSGVEVEIEKLRKERSMLMQEVVDLQQQQRRTVHHAGEVNQRLQSAEQRQKQMVSFLAKLFQNPDFLARLKQKKEQREIDSPRVRRKFVKQHQHETGIAETLKEGQIVRYQPDWRNITMSSETPELSPVSIEQSPHYLSQDLATEMSVGAEDLTSQMENIASADELAAMHGIMPTQEIIGEGSSSFELEDSLFKGKNVMIPNQEFLPEYFVSFPEVLHKENGFPEFSPLGTESMIKQEDIWDPNFNVSVATSSSGDELWGNPINYGVPEFGVTSGISESDIWDIGLESLGIDKWPADESVLDETDSQAGQPKDDRH* 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00911 1225 FunFam Serine/threonine-protein kinase CTR1 654 839 - -
Rops6g00911 1225 SMART serkin_6 575 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00911 1225 MobiDBLite consensus disorder prediction 474 496 - -
Rops6g00911 1225 ProSiteProfiles Protein kinase domain profile. 575 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00911 1225 MobiDBLite consensus disorder prediction 1 48 - -
Rops6g00911 1225 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 176 834 - -
Rops6g00911 1225 Pfam Ethylene-responsive protein kinase Le-CTR1 192 397 - -
Rops6g00911 1225 ProSitePatterns Protein kinases ATP-binding region signature. 581 602 IPR017441 GO:0005524
Rops6g00911 1225 ProSitePatterns Serine/Threonine protein kinases active-site signature. 696 708 IPR008271 GO:0004672|GO:0006468
Rops6g00911 1225 FunFam Serine/threonine-protein kinase isoform 1 566 653 - -
Rops6g00911 1225 MobiDBLite consensus disorder prediction 890 907 - -
Rops6g00911 1225 CDD STKc_MAP3K-like 581 829 - -
Rops6g00911 1225 MobiDBLite consensus disorder prediction 7 35 - -
Rops6g00911 1225 MobiDBLite consensus disorder prediction 890 909 - -
Rops6g00911 1225 PRINTS Tyrosine kinase catalytic domain signature 800 822 IPR001245 GO:0004672|GO:0006468
Rops6g00911 1225 PRINTS Tyrosine kinase catalytic domain signature 737 747 IPR001245 GO:0004672|GO:0006468
Rops6g00911 1225 PRINTS Tyrosine kinase catalytic domain signature 649 662 IPR001245 GO:0004672|GO:0006468
Rops6g00911 1225 PRINTS Tyrosine kinase catalytic domain signature 690 708 IPR001245 GO:0004672|GO:0006468
Rops6g00911 1225 PRINTS Tyrosine kinase catalytic domain signature 756 778 IPR001245 GO:0004672|GO:0006468
Rops6g00911 1225 Coils Coil 910 937 - -
Rops6g00911 1225 MobiDBLite consensus disorder prediction 1204 1225 - -
Rops6g00911 1225 Gene3D Phosphorylase Kinase; domain 1 568 653 - -
Rops6g00911 1225 Gene3D Transferase(Phosphotransferase) domain 1 654 839 - -
Rops6g00911 1225 SUPERFAMILY Protein kinase-like (PK-like) 548 828 IPR011009 -
Rops6g00911 1225 Pfam Protein tyrosine and serine/threonine kinase 576 829 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00911 Rops-Chr6 22418608 22438183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00911 1 840 MAP Kinase Kinase Kinase AT5G03730 64.943 0.0 999
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Rops6g00911 PK_Tyr_Ser-Thr 6.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00911 K14510 - gmx:100800648 1402.11