Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00900 ATGATGGCTCAGAAGCACTTGAACGAGTTACTCAAGGAGGATCAAGAACCATTCCTTCTCAAGAACTACATTTCTGAAAGGCGAAGCCAACTCAAAAAGCCTTCACCAAAAACCACCCTTCAAGTGAAGAAACAAAAACCAACAATAACACATCAAAACTCAAACTTCCCTATTAACCTTTGCAGAAACGCTTGCTTTCTCTCCTTCCAGAACACACCTGACATAAGAAAATCACCGCTTTTTGAATTTTCATCCCCAGCAAAAAGCCCCCTAAGGTCCTCCAATGCCATCTTCATTCACATCCCTGCCAAAACGGCGTCGCTTCTACTCGAAGCTGCTCTTAGGATTCAGAAACAGTCAAAAACCAAACCCCAGAACAAAAACAACGGCTTTGGGGTATTGGGTTCTTTCTTCAAGAGACTAACGCAACGAAAGAACAGGAAGAGTGAAATAGAAGGTGAAAAAAACAATGCAAAGGTTTCTGTGAAGGATATCATAAGGTGGGACTCTTCTGTTGGGAGAAGAAACAGAAAACAGGAAGGAAACAAGGGCTTTTCTCGGAAGGATAACGAGGATGTTGTTATGGCTGAGGTGGGGTTCACGTGTTCTTGCAATGGAAGGCCAAGCAGTGCTGTTTGGTCTGAGAGTAATGAAGACAAATCGTTGGAGATGGAAACTTCGAGTAGTGGACACTCTTATGACTCTGTTGAAGAAACTGAGTGTGTGGAAAAGCAGAAAGAAAACGATGATTGTGTTTGCTTTGATGATGATCATGGCTTCTTCTGTGAAAGCCCTTTCCGTTTTTTTCTCCAAAGAAGCCCTTCCTCCTCCTCCTCCTCCGGCCGTCTTAAGCCGGAATTTCCCTCGCCGGCGGCGTCACCTTGTCACAATAAAACAGAGGACAAAGAACGTAATGAAGCTGATGGTGTCAACAAATTCCAATCAGGGGAAGAAGAAGAAGAAGAGGAAGAGAAGGAACAGTGTAGTCCAGTATCTGTTTTAGACCCACCTTTTGATGATGATGATGATGGGCATGAAAACAACGATGAAGAGGGTGATTTTGATTTGGAGTGTAGCTATGCCAATGTACAAAGAACTAAGCAGCAACTATTAGACAGGCTTCGTAGATTTGAGAAACTTGCAGAGTTAGATCCATTAGAACTTGAGAAAAGAATGGTAGATCAAGAAGAAGATGAGTGTGAAACATTTATTCAAGAGGACAGTTGTGAAGATGATGCAAGCCAGATATCATGTGAAGAAAATGCCATCAGAGAAGTCTTTGAAATCCTCTGCCATTCAAACATTCATGACAAAAGGCAAGCCCCAGAAGACCTCAAGAGACTAGTTCATGATCTCATTATGGAGGAAAGGAGAGAACTTAATTCTTCAGAAGATATGAGTATGGTGATGAGAAGGGTTTGCAGGAATTTGGATTTGTGGAAGGAAGTAGAATCCAACACCATTGATATGATGATAGAAGAGGACTTCTCTAGAGAGGAAGGTGGGTGGAAGAAAAATGCTGAGCAGACAAGAGAGCTGGCTGGGGAACTTGAGCTTGCTATCTTTTGCTTTCTAGTTGAGGAATTTTCAGAGGAACTATTATGTTAA 1608 0.4223 MMAQKHLNELLKEDQEPFLLKNYISERRSQLKKPSPKTTLQVKKQKPTITHQNSNFPINLCRNACFLSFQNTPDIRKSPLFEFSSPAKSPLRSSNAIFIHIPAKTASLLLEAALRIQKQSKTKPQNKNNGFGVLGSFFKRLTQRKNRKSEIEGEKNNAKVSVKDIIRWDSSVGRRNRKQEGNKGFSRKDNEDVVMAEVGFTCSCNGRPSSAVWSESNEDKSLEMETSSSGHSYDSVEETECVEKQKENDDCVCFDDDHGFFCESPFRFFLQRSPSSSSSSGRLKPEFPSPAASPCHNKTEDKERNEADGVNKFQSGEEEEEEEEKEQCSPVSVLDPPFDDDDDGHENNDEEGDFDLECSYANVQRTKQQLLDRLRRFEKLAELDPLELEKRMVDQEEDECETFIQEDSCEDDASQISCEENAIREVFEILCHSNIHDKRQAPEDLKRLVHDLIMEERRELNSSEDMSMVMRRVCRNLDLWKEVESNTIDMMIEEDFSREEGGWKKNAEQTRELAGELELAIFCFLVEEFSEELLC* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00900 535 PANTHER OS04G0572500 PROTEIN 2 533 - -
Rops6g00900 535 MobiDBLite consensus disorder prediction 273 355 - -
Rops6g00900 535 MobiDBLite consensus disorder prediction 336 355 - -
Rops6g00900 535 MobiDBLite consensus disorder prediction 296 314 - -
Rops6g00900 535 Coils Coil 360 380 - -
Rops6g00900 535 MobiDBLite consensus disorder prediction 208 235 - -
Rops6g00900 535 Coils Coil 386 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00900 Rops-Chr6 22243949 22247250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00900 1 338 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 45.714 4.06e-65 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00900 - - gmx:100814311 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00900 6 22243949 22247250 Rops6g00900 6 22243949 22247250 ECH
Rops8g03448 8 73739703 73742910 Rops6g00900 6 22243949 22247250 PCT