Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00897 ATGGGTTCGTTCTCTGGCACTTGTGAAATTGTCGAAGCAAGGGAAGACATAAATACAGGGAAAGATGCAGGGATATATCAGTCCAATTCCGGATATAGCGTGGCTGAGAAAAATCAGAAGCATCCTGTGCTGAAACTGGGATACAAGGATAATCTAGATGATGATATTAATAAGCTGTTTGAATCACTCACTCTCAAATCTTCGTCAAGGGATTCAGGCTTTTTACAAGATGGAACAAGCCCTAAGATGAAAAGTGCATTGAAAAAACCAATCACAGGGGGTGTTTCTCGGTCCCCGCGAGTAGGGACTTCTGAGCCGGTGACTTTGAAGCAGGCATTAAGAGACTTATGTATATCTAAGGCATCAGAAATGGCTGCTATGAAAAGGTTATCAAAGTCAACAGCTTCTCCAAGAATATCTGAGGCTGGGAAGATACAGACATTGTACAATTCAGTTGTAGCTGAAGCTAGAAGATCTGGGCCTTCTAATGTTGAGAGTAAAGGGAGTACAATTGAAATATCTCTAGTACCAGAAGAACGCAAGTCACTTGCCTTGGATGAAGAATCTCAGTCTCATCAAACTGCCAAAAGCACATCATTGAGCCAAAATGTTCTTTCTTCCAAAATTGCTGTTGCAACTACACAAAATGACTCTGAGGCTTCATTGATGCAAAGTGATTTGGCATGTTCATCAACTAAAGTTGAGGTTCCATCACAGCCATTGGAGCCTGCTCAAATAGAAAAACAAACATCTGCAACTTCTCCATCTAGTTGTAATGCCAATGGAAGTAAATTAGAGTTGCCTGAAAATGCTTCCTCCCCTAAAAAATTAGGAAATAAAGCATGTGTGTCAAAGAGTGGGCGGAAAGGTAGGTTACAAACAGTGTCTTCATCATCTACTTCAGTAAATGGAAACAGAGTGTGCAAACTTTCACGCAATGGCCCCCGTACAGTCAAATCAGTCATCAAGAACAAGAATTTGGGTAAGAAGAAACTAAAGCAGGATTCTGTTTCTGCTTTATTCAATCCTCCATCCAATAAAGTGAATAACAAGTCAGTTCCTGGTACAACTCAACTTGTTTGTGAGAGATGTTGGTGTGCTATAGAAAATACAAATATAGAAAACAGAAAAGGTATTATAAAATCAGATTCTATCAGCCCTGGGGATGGAATAAACTTGAGCAATGTGCACTCTGGCTCAGCATCAACTGGCTGTAATAGTGGCAGAGAAGTTACAAAAGTGAAAAAGAACACCAGATTGAAAGAGCAACTTGAATTTTCACAAAGTTCAAAGAGTAGCCAAGGTGACTACAGTAGTAGTACAAGTACCAGTGATGAAAGCAATGTCAGTGGTTTCAGTTGTGGCAATAGACCTCACATGTCAAAGGATGCTAGATGGGAGGCCATACGACATGCTCAAATGCAGCATGGAGTTTTGGGCTTGAGACACTTCAATCTTTTGAAGAAACTTGGTTGTGGAGATATTGGAACTGTATATCTTGCTGAACTAATTGGCACAAATTGTTTGTTTGCTATTAAGGTCATGGACAATGAATTTTTGGCAAGAAGGAAGAAGATGCCTAGGGCTCAAACTGAAAGAGAAATTTTAAGGATGCTGGATCATCCTTTTCTTCCAACAACGTATGCACAGTTTACATCAGATAATCTGTCATGTCTGGTCATGGAGTATTGTCCAGGTGGAGATCTTCATGTGCTACGGCAGAAACAGCTTGGTAGAAGTTTTTCAGAGCCAGCAGCGAGGTACAATACTAAGAACTGTCCAGTAATATACTAG 1794 0.403 MGSFSGTCEIVEAREDINTGKDAGIYQSNSGYSVAEKNQKHPVLKLGYKDNLDDDINKLFESLTLKSSSRDSGFLQDGTSPKMKSALKKPITGGVSRSPRVGTSEPVTLKQALRDLCISKASEMAAMKRLSKSTASPRISEAGKIQTLYNSVVAEARRSGPSNVESKGSTIEISLVPEERKSLALDEESQSHQTAKSTSLSQNVLSSKIAVATTQNDSEASLMQSDLACSSTKVEVPSQPLEPAQIEKQTSATSPSSCNANGSKLELPENASSPKKLGNKACVSKSGRKGRLQTVSSSSTSVNGNRVCKLSRNGPRTVKSVIKNKNLGKKKLKQDSVSALFNPPSNKVNNKSVPGTTQLVCERCWCAIENTNIENRKGIIKSDSISPGDGINLSNVHSGSASTGCNSGREVTKVKKNTRLKEQLEFSQSSKSSQGDYSSSTSTSDESNVSGFSCGNRPHMSKDARWEAIRHAQMQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTTYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARYNTKNCPVIY* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00897 597 MobiDBLite consensus disorder prediction 380 456 - -
Rops6g00897 597 MobiDBLite consensus disorder prediction 71 103 - -
Rops6g00897 597 MobiDBLite consensus disorder prediction 233 310 - -
Rops6g00897 597 Pfam Protein kinase domain 485 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00897 597 MobiDBLite consensus disorder prediction 289 310 - -
Rops6g00897 597 FunFam Serine/threonine-protein kinase D6PK-like 482 567 - -
Rops6g00897 597 MobiDBLite consensus disorder prediction 423 455 - -
Rops6g00897 597 PANTHER FLIPPASE KINASE 1-RELATED 192 588 - -
Rops6g00897 597 Gene3D Phosphorylase Kinase; domain 1 478 593 - -
Rops6g00897 597 SMART serkin_6 484 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00897 597 MobiDBLite consensus disorder prediction 387 411 - -
Rops6g00897 597 ProSiteProfiles Protein kinase domain profile. 484 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00897 597 MobiDBLite consensus disorder prediction 233 268 - -
Rops6g00897 597 SUPERFAMILY Protein kinase-like (PK-like) 464 588 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00897 Rops-Chr6 22201148 22202941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00897 1 588 AGC Kinase Gene Family AT3G52890 44.807 1.37e-138 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops6g00897 Pkinase 1.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00897 - K08286 gmx:100813470 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00897 6 22201148 22202941 Rops8g03461 8 73942758 73946340 ECH
Rops6g00897 6 22201148 22202941 Rops6g00897 6 22201148 22202941 ECH
Rops8g03461 8 73942758 73946340 Rops6g00897 6 22201148 22202941 PCT