Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00890 ATGGAACTTGAACCTTTGGCTGCCTGCTCACTATTGAGGTTCTTCAGTGATGTCTATTTTGGTTATTATTTGATTTTTCCACTCATCATCATCATCATCCTGGTGTTCACCCTCTCACCTAGTTTTCCCAGGATGAATATCTTGTGTAGTTGTGAAACTTGTGATGCTTATCTCACTTCAAGTTGGTCCAAAGATTTTGATAATCTTTGTGATTGGTATGCTCATCTTCTCAGAAAGTCCCCCACTAAAACCATCCACATACACGTCCTTAGGAACACAATAACTGCAAACTCGGGTAACGTTGAGTACATACTCAATACCAGATTCGAGAACTACCCAAAAGGGAAAACCTTTTCCATGATCTTGGGTGATTTTCTGGGTCGTGGTATTTTCAACGTGGACGGTGAATTGTGGAGGTTTCAGAAGAAAATGGCAAGCTTGGAACTCAACAAGCACTCCATAAGATCCTTTGCCTTTGAAATCGTCAACTGTGAAATCCAACACCGACTTGTCCCTCTCCTATTGTCAAAGCAAGACACATTCTTAGATTTACAAGATGTTTTCAGGAGATTCTCGTTTGACAGCATTTGCAGATTCTCCTTTGGGTTAGACCCTATGTGTCTTGAGAAGTCTCTACCCATGTCTGAGTTTGCTGTTTCCTTTGACTTAGCATCAAAATTATCAGCTGAAAGAGCCATGGCTGTGTCCCCTTTTGTTTGGAAGATCAAGAGGTTACTCAATCTAGGTGGAGAGAAACAACTAAAAGAAGCTGTAAGAATGATCAATATCTTAGCCAAAGAGGTCATAAAGGAAAAACGCAAAATGGGGTTTGCTGACCACAAAGATTTGTTGTCAAGATTCATGAGTACTGTCCATGATGACAAGTATCTCAGAGACATTATCATAAGCTTCCTATTGGCTGGTCGTGACACTGTGGCTTCAGCCCTCACAAGTTTCTTTTGGCTCCTTGCAAAAAACCCAGAAGTGGAATCAGAGATTCGTGTAGAAGCAGATCAAGTTCTTGGACCACACAAGGACATCACAAACTTTGAACAACTCAGACAACTGCACTATTTACAAGCAGCAGCACATGAGAGTATGAGACTCTACCCCCCAATTCAATTCGATTCAAAGTTCTGTTTGGAAGATGATGTTTTACCAGATGGGACACAAGTGAAGAGTGGAACTAGGGTTACATACCATCCTTATGCTATGGGTAGGTTGGAGGAACTGTGGGGCCCAGATTGTTTAGAGTTTAAGCCCCAAAGGTGGTTGAAAGATGGTGTGTTTCACCCTGAAAATCCATTCAAATACCCTATTTTTCAAGCTGGGTTGAGGGTGTGTATTGGTAAAGAAATGGCTATTATGGAGCTCAAAAGTGTGGCACTTTCATTGCTCAGAAAGTTTAACATCAAATTGGTGGCAGCACCTTTTCATGGTAACCCACGTTTCTCTCCTGGCCTCACTGCCACTTTTGCTTGTGGCCTTCCCGTAATGGTTTGTGAAAGAGGAATCAAACCATCTCAACCATGTCATAATTGA 1542 0.417 MELEPLAACSLLRFFSDVYFGYYLIFPLIIIIILVFTLSPSFPRMNILCSCETCDAYLTSSWSKDFDNLCDWYAHLLRKSPTKTIHIHVLRNTITANSGNVEYILNTRFENYPKGKTFSMILGDFLGRGIFNVDGELWRFQKKMASLELNKHSIRSFAFEIVNCEIQHRLVPLLLSKQDTFLDLQDVFRRFSFDSICRFSFGLDPMCLEKSLPMSEFAVSFDLASKLSAERAMAVSPFVWKIKRLLNLGGEKQLKEAVRMINILAKEVIKEKRKMGFADHKDLLSRFMSTVHDDKYLRDIIISFLLAGRDTVASALTSFFWLLAKNPEVESEIRVEADQVLGPHKDITNFEQLRQLHYLQAAAHESMRLYPPIQFDSKFCLEDDVLPDGTQVKSGTRVTYHPYAMGRLEELWGPDCLEFKPQRWLKDGVFHPENPFKYPIFQAGLRVCIGKEMAIMELKSVALSLLRKFNIKLVAAPFHGNPRFSPGLTATFACGLPVMVCERGIKPSQPCHN* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00890 513 SUPERFAMILY Cytochrome P450 67 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00890 513 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00890 513 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00890 513 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00890 513 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00890 513 CDD CYP86A 81 475 - -
Rops6g00890 513 PANTHER CYTOCHROME P450 55 490 - -
Rops6g00890 513 Gene3D Cytochrome P450 58 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00890 513 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00890 513 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00890 513 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00890 513 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00890 513 Pfam Cytochrome P450 100 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00890 Rops-Chr6 22070322 22072507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00890 49 503 Cytochrome P450 AT2G27690 61.123 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00890 K20624 - gmx:102662117 747.658