Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00889 ATGGAGCTGCAAGCTCAAGCTCTTCAGCTTAATCATCCCTCAAAAAAATTGTTTGTTTTTGGAGACTCGTATGCTGATACAGGCAACACTAGAAAAGATGTACCTGGTTCATGGAAAGACCCTTATGGCATAAGCTTTCCCGGAAAACCTGCCGGAAGATTCTCCGACGGTAGAGTTATAACTGATTACATTGCTAAGTATTTGGGACTGAAATCGCCACTCCCCTACCAATTTAGGAAACAGATGCCACAGTATTTGAAGTATGGGATGAACTTTGCCTACGGTGGTACAGGTGTATTTGATACAGCCTCTTCAAACCCAAATATGACAGTCCAGATCGATTTCTTCAAGCAGCTCATCGAAGAAAAAGTGTACACTACCTCAGATCTCAGCAACTCAGTGGCTCTTGTATCTGTGGCTGGAAATGACTACAATTACTACTTGGCCACAAATGGCCCTGCCGAGAGTTTCCCATCTTTCATCGCCTCAGTGGTTAATCAAACCACCAAAAATTTGATTCGCATCCAAAGGTTAGGAGTGAAGAAAATTGTTGTGGATGGTCTACAACCCCTTGGTTGTGTTCCTCAAATCACAGCTTCAAACTCGTTCCAACAGTGCAATAGCACCTTTAACAACCTTGTAGTTCTCCACAACAACTTGTTGAACCAATCTGTGACCAAGTTGAACCAAGAAAGCAAGGATCACAACACCTTCGTAATTCTTGACCTTTATGACAGTTTCATGTCAGTGCTTAACAACCCATCCACCAATAACATAACGGACCAGTTCAAGCCATGCTGCGTTGGGGTAAGCAGCGAGTATAATTGTGGGAGCGTGGACGAGAACAATGTGAAGAAATATAAGGTTTGTGAAAATCCCAAATCAGCTTTCTTTTGGGATTTGTTGCACCCAACACAAGCTGGTTGGAATGCTGTGTATAACAAGTTGGAGAAGGGAGATCTTCGTCAAATTCAATACTAG 981 0.4271 MELQAQALQLNHPSKKLFVFGDSYADTGNTRKDVPGSWKDPYGISFPGKPAGRFSDGRVITDYIAKYLGLKSPLPYQFRKQMPQYLKYGMNFAYGGTGVFDTASSNPNMTVQIDFFKQLIEEKVYTTSDLSNSVALVSVAGNDYNYYLATNGPAESFPSFIASVVNQTTKNLIRIQRLGVKKIVVDGLQPLGCVPQITASNSFQQCNSTFNNLVVLHNNLLNQSVTKLNQESKDHNTFVILDLYDSFMSVLNNPSTNNITDQFKPCCVGVSSEYNCGSVDENNVKKYKVCENPKSAFFWDLLHPTQAGWNAVYNKLEKGDLRQIQY* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00889 326 Gene3D SGNH hydrolase 3 319 IPR036514 -
Rops6g00889 326 PANTHER OSJNBB0059K02.9 PROTEIN 7 322 - -
Rops6g00889 326 CDD SGNH_plant_lipase_like 17 320 IPR035669 -
Rops6g00889 326 Pfam GDSL-like Lipase/Acylhydrolase 17 315 IPR001087 GO:0016788
Rops6g00889 326 SUPERFAMILY SGNH hydrolase 14 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00889 Rops-Chr6 22031922 22036730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00889 5 312 Pollen Coat Proteome AT1G75930 29.940 5.34e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00889 - - gmx:100789208 506.138