Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00887 ATGATGGACTCACACAAGCAACTGTTTTCCTTCTTATGTTTTTCCCTAGTACTTGTACTTCTCTCAGGACAAATGGGGCAGCAAGTTGAGGCTCGCAAGCTTAATCATCCCTCAAAAAAATTGTATGTTTTTGGGGACTCATATGTTGATACCGGCAACTATAGAAAAAATGTATCTGGTTCCTCATGGAAAGACCCTTATGGCATAACCTTTCCCCAAAAACCTGCCGGAAGATTCTCCGATGGAAGAGTTATAACTGACTTTATTGCGAAGTATTTGGGTCTGAGATCGCCACTCCCCTACAAATTCAGGAAACTGGTGCCGCAGAAGTTGAAGTATGGGATGAACTTTGCTTATGGTGGTACAGGTGTATTCAATACAGCCTCTTCAAACCCAAATATGACAATCCAGATCAATTTCTTCAAGCAGCTCATCGAAGAAAAAGTGTACACTGCCTCAGATCTTAGCAACTCAGTGGCTCTAGTATCCGTGGCTGGAAATGACTACAATTTTTACTTGGCCACAAATGGCTCTGCCAAGAGTTTCCCATCTTTCATCGCCTCAGTGGTTAATCAAACGACCAAAAATTTGATTCGCATCCAAAGGTTAGGAGTGAAGAAAATTGTTGTGGATGGTCTACAACCCCTTGGTTGTGTTCCTCAAATCACAGCTTCAACCTCCTTCCGACAGTGCAATAGCACCTTTAACAACCTTGTAGTTCTCCACAACAACTTGTTGAACCAATCTGTGACCAAGTTGAACCAAGAAAGCAAGGATCACAACACCTTCGTAATTCTTGACCTTTACGACAGTTTCATGTCAGTGCTTAACAATCCATCCACCAATAACATAACGGACCCGCTCAAGCCATGCTGCGTTGGGGTAAGTAGAGAGTATTCATGTGGAAGTGTGGACGAGAACAATGTTAAGAAATATAAGGTTTGTGAGAATCCCAAATCAGCTTTCTTTTGGGATCTGTTCCACCCAACACAAACTGGTTGGAATGCTGTGTATAACAAGTTGGAGAAGGGAGCTCTTCATCAAATTCAATACTAG 1056 0.4223 MMDSHKQLFSFLCFSLVLVLLSGQMGQQVEARKLNHPSKKLYVFGDSYVDTGNYRKNVSGSSWKDPYGITFPQKPAGRFSDGRVITDFIAKYLGLRSPLPYKFRKLVPQKLKYGMNFAYGGTGVFNTASSNPNMTIQINFFKQLIEEKVYTASDLSNSVALVSVAGNDYNFYLATNGSAKSFPSFIASVVNQTTKNLIRIQRLGVKKIVVDGLQPLGCVPQITASTSFRQCNSTFNNLVVLHNNLLNQSVTKLNQESKDHNTFVILDLYDSFMSVLNNPSTNNITDPLKPCCVGVSREYSCGSVDENNVKKYKVCENPKSAFFWDLFHPTQTGWNAVYNKLEKGALHQIQY* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00887 351 PANTHER OSJNBB0059K02.9 PROTEIN 13 348 - -
Rops6g00887 351 Gene3D SGNH hydrolase 28 345 IPR036514 -
Rops6g00887 351 SUPERFAMILY SGNH hydrolase 37 341 - -
Rops6g00887 351 CDD SGNH_plant_lipase_like 41 344 IPR035669 -
Rops6g00887 351 Pfam GDSL-like Lipase/Acylhydrolase 41 340 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00887 Rops-Chr6 22007588 22011787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00887 31 349 Pollen Coat Proteome AT1G75930 29.204 6.41e-31 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00887 - - gmx:100800932 527.709