Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00862 ATGCTAGGGAAAAAGATGGTATCATTGAAGAAACTAGCCAAGAAGGTAAAGGCTGTAGGTGGAGCTGACCATGACCCTCCCTACAATGAATGTTTACTCAAGGGATATGAGGAAGAATCCCCTTCAAGCACAACCCCAACTGGTTTTTTTGCACTTTATGTGGGAGAAGAACGCCAGAGATATGTGGTTCCAACTAGCTACCTTTCTCACCCTTTATTCAAGATACTGCTGGAGAAGGCATACAATGAATTTGGATTTGCACAGAGGAATGGCCTGGTAGTTCCATGCAGTGTTTCCACATTTCAAGAGGTGGTAAATGCTATAGAATGCAACAATGGCAAGTTTGACTTAGGCAAGATTTTTGAAGATTTTGTCTGA 378 0.4206 MLGKKMVSLKKLAKKVKAVGGADHDPPYNECLLKGYEEESPSSTTPTGFFALYVGEERQRYVVPTSYLSHPLFKILLEKAYNEFGFAQRNGLVVPCSVSTFQEVVNAIECNNGKFDLGKIFEDFV* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00862 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 34 104 IPR003676 GO:0009733
Rops6g00862 125 Pfam Auxin responsive protein 24 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00862 Rops-Chr6 21590657 21591034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00862 41 111 Calmodulin-binding Proteins AT5G20810 52.113 1.40e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00862 K14488 - gmx:100790208 221.09