Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00860 ATGCAGATTGTACCTCTGCAAATCAGTATTCAAGAAATGGAATTTCGACCTCTCATCCAACTCAGACGTGACCGTGATACTGGCACGGTGTTTGAGGTTCTTGATGGCATGCTTCTCAAGGATGGATATGTATACAAGAAAGTATCTAAGGATTCATTAAGTTTATGGGGTGTTGTGCCAACAGAAGAGGAACTGTTGAAGTTTGGGCCTTTTGAAAACAATGAATCAAAGGATTTGGAGTGGCTCTCTAAGCTTTATGATTTGATGCACCAGGCTCAAGGGGGAAGTGGATTGTCCATTCTACATGAAAACTGGAAGTATACACCAGCAATTAATATATGGAGTATCTGTTGCATCATTGCTGAAGTATTAACAGGAAAGAGCCATTTTTTTCCTGGAAGAAATGTAGTCCATCTGTTGGATAGGATAACAGATCTACTTGGGACTCCCTCACTGGATACTATATCACAGGATGTTGTGGCTTAG 486 0.4074 MQIVPLQISIQEMEFRPLIQLRRDRDTGTVFEVLDGMLLKDGYVYKKVSKDSLSLWGVVPTEEELLKFGPFENNESKDLEWLSKLYDLMHQAQGGSGLSILHENWKYTPAINIWSICCIIAEVLTGKSHFFPGRNVVHLLDRITDLLGTPSLDTISQDVVA* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00860 161 SUPERFAMILY Protein kinase-like (PK-like) 102 156 IPR011009 -
Rops6g00860 161 PANTHER SUPPRESSOR OF TY 5 8 87 IPR039659 GO:0006357|GO:0032784
Rops6g00860 161 Gene3D Transferase(Phosphotransferase) domain 1 102 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00860 Rops-Chr6 21566282 21571467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00860 106 157 MAP Kinase Gene Family AT2G42880 76.923 1.86e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00860 - - gmx:100787703 137.887