Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00823 ATGTCTGGCTCCAAAAGAAAGCTAGTTTTGAACTCTGTGTCTGTGAACCTGGGCTGTGGAACCTGTAGAAGACCAAAACTTGGTCTCATATTCCACCCAAAGCCTAAACCCAAGAACCCCACCTACCAAAAACACAAGCTTTCAACCCGTTGGAGTGAGGACAAATATGAAACTGCCACTAGCACCACAAATACTACCCCAAACACCAACACCACATTCTCACCCTTCTCACAGTTTTGTGACTATGAGAAATCCTCAGGGACCATAAAAGGATTTGGAAGAGTTGGAAGTGAAGGAGTGGCTGTAGAGAAAGATTCTGATGACCCTTATTTGGATTTCAGGCATTCCATGCTCCAAATGATATTGGAGAATGAGATATACTCCAAGGATGATCTAAGGGAGCTTCTGAACTGTTTTCTTCAGCTCAATTCACCACAACATCATGGAGTTATAGTCAGAGCTTTCACCGAGATCTGGAATGGGGCCTTCTCTGTGAGGTCTAGTTCACCAAGGTTCCACCTGAAAACTAAGTCACGTGACTTCTAG 546 0.4414 MSGSKRKLVLNSVSVNLGCGTCRRPKLGLIFHPKPKPKNPTYQKHKLSTRWSEDKYETATSTTNTTPNTNTTFSPFSQFCDYEKSSGTIKGFGRVGSEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSPQHHGVIVRAFTEIWNGAFSVRSSSPRFHLKTKSRDF* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00823 181 ProSiteProfiles OVATE domain profile. 102 161 IPR006458 -
Rops6g00823 181 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 61 163 IPR038933 GO:0045892
Rops6g00823 181 Pfam Transcriptional repressor, ovate 106 160 IPR006458 -
Rops6g00823 181 NCBIfam uncharacterized plant-specific domain TIGR01568 100 159 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00823 Rops-Chr6 21002618 21003163 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops6g00823 Ovate 4.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00823 - - mtr:25499452 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00823 6 21002618 21003163 Rops6g00823 6 21002618 21003163 ECH