Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00816 ATGGAGTGTGCATCCAAATTTGCAGAAAGAGCGATTGATTTTGTGTTGGACTTGAGTTATCGCCATATAAGTTACATAATCTTTTATGGGGAATATGTTAGCGAACTAAACCGTCAAGTTAAGGATCTTGGACATGAAACAGAGAGTGTGGAACATGCAGTTGATGAAGCTGAGAATAATCTAGGAATAATTGAAGGTGGTGTTAGATCTTGGCTTCAAGAAGTGAATGAATTTAAAATTAAAATAGAGGAGTTTCAAAACGATGAAGGCCACACAAAGACGAGGTTTTCCATTTGTTTAATTCCTTATTTGAGGAATAGGCATAGACTAGGCAGAAAAGCAAAGAAGATGACAGATAATGTAAAGGTATTAATAAATAAGTCCAAGTCTGTTCCAATTTTCTATGAGCGGAACCCAACATCTATAGATGTCACTTTGTCTAATGTTGGCTACGTAAAAATAAAATCTAGAGAAGATAAAATGGGAGAGATAATGAAAAGCCTGGAAGATTCTACAGTGAGAATGATTGGAGTGCATGGACCAAGTGGTGTGGGTAAGAGCACCTTAATCAAAGAAATTGCTAAGAAAGCTCGAGACAAGAAGTTGTTTAATGTGGTAGTTATAGTAGATATCACAAAAAATCCCAACACACAAAAAATCCAAGAAGAAATTGCTTATGTGTTAGGATTAAGACTGGAAGGAGAAGGTGAGATTGTAAGAGCAGATCGTCTTAGGAGGAGGTTAAAGAAAGAAAAGGAGAACACCCTTGTAATCCTAGATGACCTCTGGGATAGATTGGACTTGAATAAGATAGGGATTCCATTTGATGATGATGATGATGATTTAAGTCATATGACAATCAAAGATATAAAGGATCCTAACTTCCAAATGGTGAAAAAAGGAAAATCTCTTGGTGATTATAAGGGGTGCAAAATTTTGCTAACTTCCAGATTTAGAAAAGTATTATCTGATAAAATGGATGTTAAGTCAATTTTCAATGTGAGGGAATTAGATGACAAGGATGCTTTGATGTTGTTTAAGAAGGTGGTTGGAATACCTGATGAAATGTTCAATTTTAAACAAGAGATTGTTAAGACGTACTGTGCCGGGTTACCCATGGCAATAGTTACAGTTGGAAGGGCTTTAAGAAATAAGAGCGAGTCAGTGTGGGAAGCTACACTAGAAAAACTTAAAAAAGAAGAATTGATTGGAGTGCAGATTTCTGTAAAGATGAGTTATGACGATCTAGAAAGTGAGGAGCTGAAGTCTATTTTCTTACTTTGTGCTCAAATGGGTCATCAACCATTAATTATGGACTTGGTGAAGTATTGCTTTGGTCTAGGTATACTTGAAGGGGTCTATACGTTAAGGGAAGCTCAAGATAGAATATATACATCAATTCAAAAGCTAAAAGACTCGAGTTTGATGTTGGATGGAAGCTCCAGTGGTCGTTTCAATATGCATGATATGGTTCGAGATGTTGCTTTATCTATAGCACATAAAGAGAAAAATGTATTTGCTTTGAGAAATGGAAAACTAGATGACTGGCCCGATAAGGATGAATTGGAGAGGTGCACCACTCTTTCTATATGCAACAGTGATATCATTGATGAGCTTCCTAAAGTTATAAATTGTCCTCAGCTTAAATTCTTTCAAATTGACAGTGATGATCTATCTTTGAAAATACCTGAGAACTTTTTTGAAGGAATGGAAAAACTCAGAGTATTGATATTGACTGAAGGGCAAACAACAAATAGGGATCACATGGAAATTACTATTGCAGAAGACGAGCACAGTGTCTTTAGTGAACTGGTTAAAATTCCAAACTTAGAGAGCCTAAAGTTATCCTCAATCAACAGTCATCAGATATGGAGCGATCAGCCTTTATCAAGTTCTTGCTTTCAAAATTTAATAAAATTAGAATTGAAAGATTGCTATAAATTGAGATACTTATGTTCATTGTCCATGGCTAGCAGTTTGAATAAATTGAAAGGCCTTTCTATAAGAAACTGTGGGATGATGGAGAAGATTTTTGACATCGAAGGAAACGATGTGGACAAGGTCTGTATCTTTCCTAAATTGGAGGAAATCCACCTCACCAAACTGAATAAGTTGACAAACATATGGCAAACTAAAGTGGGTGCTGATTCCTTTTCTAGTCTCATTTTTGTGCAAATTGAAGGGTGCGAAAAACTAGACAAGATTTTCCCAAGTCACATGACAGGTTGGTTTGGGAGTTTAGACAGTTTGAAGGTTGTTGATTGCGTGTCAGTGGAAGTGATTTTTGAAATCCAAGATTCTAAGCAAAAAGATGCATCTAGGATGGACACAAAACTACAACTTATTCTTTTAGACCAACTCCCAAACCTGAAGCAAGTATGGGACAGAGATCCAGGAGAAATTCTTAACTTCAAAAATCTGCGAGGTATAGAGGTTAATAGGTGTGATAAACTAAGCTATGTCTTACCAACTTCGGTGGCCAAAGATCTTGAATTGCTGGAAAGCATTTCAGTAAAGCTTTGTCATGGAATGGAGGAAATTGTTGGCGGGAAAGATGGATCAGGAAAAACATTAGTGTTTCCTGAAGTAACCTACATGGAACTATATGGCCTATCAAACATTAAACGTTTCTTCCCGTGGGGACATACTATAGAGTGTCCAAAATTGAAGCATTTGGCAGTGGACTTTTGTGAGAAGCTGGAAATATTCACAACCGAAGCCACAAATGTAGAAAAACAACCAGTTCTCTCAGCTGAAAAGGTAATCTCCAATTTGGAGTATATGGAAATCGGCTTAACGGAAGCAACCTGGTTACAGAGCAACAATGGGAAGTACCGAATGCACCGTCTGAAAGAGCTTACCTTGCGCTCACTGGGGAGTATTGAACTTCTCTACTGGTTGCTGAACAGAATGCCTAATCTAGAAAGGTTAAACTTGATTTTCTCTCACGATATGCTTAAAGAGTTGGTGCCAAGTGAAAACAATGCAGCACAAGAAACACTAGGAACCGTATTACAGCTTAAGACATTGACTTTGTGGTCGTCAAAGATAAAGGATCTAGGATTTGAACGAGACCCAATTCTACAGAGACTAGAGCATTTGGTCTTATATGCCTGCCCTCATTTGATCAATTTAGCACCTTCCTCGGTATCTTTGACTCACTTGACATATTTGGAAGTAAACTCTTGTGGTGGATTAATAAATTTAATGTCATCCTCCACAGCCAAAAGCATGGTTCAACTTGCAAAAATGAAGGTGATGCAATGTGAAGTAAAGGAAATAGTAACCAATGAGGGAAATGTAGGAGGCAGAGTGATCGAAGTTGTATTTACCAAATTGATTTCTATAGAACTTGTGACATTAAAAAACCTCACAAGTTTCTGCAGCTGCAAGAACTTGGAATTTAAATTCCCATCATTGGAAAGATTGATTGTGAGAGAATGTCCCGAGATGGAAACATTCACTAAGAGTCACACAAGAGCACCAAAGCTACAAAACATACTTGCCATTGAAGGAGGAGAGGAAGAAAAAAGGTATTGGGAAGGTGACTTGAATGCCACTATACAAAAAGTTTTCAAAGATAAGGTTTCTTATGAATACACGGAGAACCTGGACCTTTCCCGTTATCCTAAATTATTAGAACAAGTATGGCATCGCAATGATTTGGTGCAAGAGAACACCTTTCGCAATTTGAAAACCTTGGTGGTAAAACAATGTTGTAATCTAGTGCACGTAATTCCATCTCATTTGCTTCCTTGCTTTGAGAATTTGGAAGAGTTAGAAGTACGGAATTGTGATGCAGTGCAGGTCATATTTAATATAAATGACATGAGGGTGACAAAAGCTTTGGGAACATTCCGTTTGAAAAAGTTGTCTTTAAGTGATCTACCAAAACTGAAGTGTGTATGGGACAATGATCCTGAAGGAATTTTTAGCCTTCAAGTGCTACAGGGTATGAGTGTTGAAAGATGTCATAGCCTTAAAAGTTTGTTTCCAGCATCGGTTGCTAAAAATCTTACCAGACTTGAAATCCTTAGTGTAATACACTGTATGGAGTTGGTAGAAATATTTTCAAAGGATGAAATAGCCACAAAAGAAGGGGCAACTATAGAGTTTGTGTTTCCTTGTCTGACCTCATTGCAGTTAAAAGAATTGCCAGGACTCAAGTACTTTTATCCTGGGGAGCAAGCCTTTATTCAAATTGAAAAGGTTATCCAAATCCCCAGTTTGGAGAAATTGTCATTCGGAATTGGAGACACCACAGTTATATGGGATCGAGGGTCTCGGAAATTGCGATTCGAGAAACTGCATCTCTTCCGAGAAGAATCAGATAGTGTTCTATACAGATTCCTTGTCATGTTACCCCATATAAAAAAGCTTGAACTGTTCCAGGGTTTGTTCAAAGAGATGTTATCCGCTGAAAAACCTAATGCAGATTACACTAGAGTCCTCTTGCACCTAAAAGAGTTGGAGTTAATTGATCTACGTAATCTCAATTCCATTGGTTTAGAGCACTTTTGGCTACACCCCATTCCCGAAAATCTACAAACGTTAAAAGTACTACAATGTGGTCATTTAGTAAACTTGGTACCATGCACTGTATCTTTCTCCAATCTCACATATTTGTATGTATATGATTGCAAAAGAATGCTACATTTTTTCACATCCTCAACAGCCAAAAGTTTGGCTCAACTCAAAGAGATGAAGATAGAACAGTGCGAATCAATGCAAGAGATAGTGTCCACAGAGGAAGATGAATCAAAGGAGGATGAGAAAATAATATTTGAGCAGCTTGAGACTTTGTATCTTAAAGATTTACCACGGCTTAGGTGCTTTTACCCAGGAAATTTTACTTTATGTTTTCCATCCATGGAGAAAGTGTCCATAATCAGATGCAGGAGGATGAAAACTTTCTGTCCAGTCAACATAATAGATCCAACCAAGTTGTCTTCTGGAGTTACAATCTCTGAATATGCAACAACCTCATGGGAAGGTGATCTTAATTCTACCATGCGCAAGAGGTTTGAGGAAGAGATCTCAGAGTCAGCACCTTGTGTGCTCAATGACCACATAAAAGTACTACCGTCTAATTTACTTCCTTTCTTAACTCAATTGGTTAAGTTGGAAGTTCGAAACTGTAGTTCAGTGAAAACCATATTTGATGTGAAATGCATAATAGAAGACAGAAAAATGAAAACTATGGGACTAGACATGCTCATGCTCCCCCTCTCCTTTTCCCTGAAGATATTGATTTTAGAGCAGCTACCTAATCTGGAGAATGTTTTGAATGAAGATCCTCAAGGAAGTGTAAGGGTTCAACTTCTACAAGTAGTATATGTTGACAAATGTAAATGCCTTACAAGTTTGTTTCCAGCATCAGTAGCCAAAGATCTTGTGAAACTTGAAAATCTAGCTGTGAAACACTGTGAGGGGTTAATGGCAATTGTTGCAGAAGATTATGCAGATCCAAAAGGAACAAATCTAGAGCTTATTACGTTCCCTTGTGTGACCTCATTGACGCTACTAGAATTGCCAAAGCTCAAGAATTTTTACTGTTCGCTGCAATGTGACATGTTGAAGACATCCACACATCAAGACCCACATACTGAAGAGAAAGTGATATGTATTGAAAAGCTTACACCCAACCTGCAGTCCTTGTCACTGGGTGAGAAAGAATTGAAGATGATTTGGCAGGGAAAACTCTTCCACAAATTAAAAGTTCTTGTTTTGCTGTGCTTTCAAATAGAGTCAGATGTATTGCCATACCGATTTCTACAACAGGTACCCAATATAGAGAAGCTTGTGGTGATTGATAGTTCCTTCAAGGAGATTTTCTGCTTTCAAAGACCTAATGTGGACTATACTAGTCTCCTATCACAGCTAAGTGTTAAGGTTGGAGTTACTCTTGGAGCTAATTTCCATTGGGTATGA 5931 0.3768 MECASKFAERAIDFVLDLSYRHISYIIFYGEYVSELNRQVKDLGHETESVEHAVDEAENNLGIIEGGVRSWLQEVNEFKIKIEEFQNDEGHTKTRFSICLIPYLRNRHRLGRKAKKMTDNVKVLINKSKSVPIFYERNPTSIDVTLSNVGYVKIKSREDKMGEIMKSLEDSTVRMIGVHGPSGVGKSTLIKEIAKKARDKKLFNVVVIVDITKNPNTQKIQEEIAYVLGLRLEGEGEIVRADRLRRRLKKEKENTLVILDDLWDRLDLNKIGIPFDDDDDDLSHMTIKDIKDPNFQMVKKGKSLGDYKGCKILLTSRFRKVLSDKMDVKSIFNVRELDDKDALMLFKKVVGIPDEMFNFKQEIVKTYCAGLPMAIVTVGRALRNKSESVWEATLEKLKKEELIGVQISVKMSYDDLESEELKSIFLLCAQMGHQPLIMDLVKYCFGLGILEGVYTLREAQDRIYTSIQKLKDSSLMLDGSSSGRFNMHDMVRDVALSIAHKEKNVFALRNGKLDDWPDKDELERCTTLSICNSDIIDELPKVINCPQLKFFQIDSDDLSLKIPENFFEGMEKLRVLILTEGQTTNRDHMEITIAEDEHSVFSELVKIPNLESLKLSSINSHQIWSDQPLSSSCFQNLIKLELKDCYKLRYLCSLSMASSLNKLKGLSIRNCGMMEKIFDIEGNDVDKVCIFPKLEEIHLTKLNKLTNIWQTKVGADSFSSLIFVQIEGCEKLDKIFPSHMTGWFGSLDSLKVVDCVSVEVIFEIQDSKQKDASRMDTKLQLILLDQLPNLKQVWDRDPGEILNFKNLRGIEVNRCDKLSYVLPTSVAKDLELLESISVKLCHGMEEIVGGKDGSGKTLVFPEVTYMELYGLSNIKRFFPWGHTIECPKLKHLAVDFCEKLEIFTTEATNVEKQPVLSAEKVISNLEYMEIGLTEATWLQSNNGKYRMHRLKELTLRSLGSIELLYWLLNRMPNLERLNLIFSHDMLKELVPSENNAAQETLGTVLQLKTLTLWSSKIKDLGFERDPILQRLEHLVLYACPHLINLAPSSVSLTHLTYLEVNSCGGLINLMSSSTAKSMVQLAKMKVMQCEVKEIVTNEGNVGGRVIEVVFTKLISIELVTLKNLTSFCSCKNLEFKFPSLERLIVRECPEMETFTKSHTRAPKLQNILAIEGGEEEKRYWEGDLNATIQKVFKDKVSYEYTENLDLSRYPKLLEQVWHRNDLVQENTFRNLKTLVVKQCCNLVHVIPSHLLPCFENLEELEVRNCDAVQVIFNINDMRVTKALGTFRLKKLSLSDLPKLKCVWDNDPEGIFSLQVLQGMSVERCHSLKSLFPASVAKNLTRLEILSVIHCMELVEIFSKDEIATKEGATIEFVFPCLTSLQLKELPGLKYFYPGEQAFIQIEKVIQIPSLEKLSFGIGDTTVIWDRGSRKLRFEKLHLFREESDSVLYRFLVMLPHIKKLELFQGLFKEMLSAEKPNADYTRVLLHLKELELIDLRNLNSIGLEHFWLHPIPENLQTLKVLQCGHLVNLVPCTVSFSNLTYLYVYDCKRMLHFFTSSTAKSLAQLKEMKIEQCESMQEIVSTEEDESKEDEKIIFEQLETLYLKDLPRLRCFYPGNFTLCFPSMEKVSIIRCRRMKTFCPVNIIDPTKLSSGVTISEYATTSWEGDLNSTMRKRFEEEISESAPCVLNDHIKVLPSNLLPFLTQLVKLEVRNCSSVKTIFDVKCIIEDRKMKTMGLDMLMLPLSFSLKILILEQLPNLENVLNEDPQGSVRVQLLQVVYVDKCKCLTSLFPASVAKDLVKLENLAVKHCEGLMAIVAEDYADPKGTNLELITFPCVTSLTLLELPKLKNFYCSLQCDMLKTSTHQDPHTEEKVICIEKLTPNLQSLSLGEKELKMIWQGKLFHKLKVLVLLCFQIESDVLPYRFLQQVPNIEKLVVIDSSFKEIFCFQRPNVDYTSLLSQLSVKVGVTLGANFHWV* 1977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00816 1976 SUPERFAMILY L domain-like 798 1155 - -
Rops6g00816 1976 SUPERFAMILY L domain-like 1228 1649 - -
Rops6g00816 1976 Coils Coil 68 88 - -
Rops6g00816 1976 SMART AAA_5 172 342 IPR003593 GO:0016887
Rops6g00816 1976 SUPERFAMILY L domain-like 507 841 - -
Rops6g00816 1976 Gene3D Ribonuclease Inhibitor 1434 1648 IPR032675 -
Rops6g00816 1976 Gene3D Ribonuclease Inhibitor 1196 1356 IPR032675 -
Rops6g00816 1976 Gene3D Ribonuclease Inhibitor 481 777 IPR032675 -
Rops6g00816 1976 Coils Coil 40 60 - -
Rops6g00816 1976 Gene3D - 149 333 IPR027417 -
Rops6g00816 1976 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 428 IPR027417 -
Rops6g00816 1976 PRINTS Disease resistance protein signature 658 674 - -
Rops6g00816 1976 PRINTS Disease resistance protein signature 249 263 - -
Rops6g00816 1976 PRINTS Disease resistance protein signature 368 382 - -
Rops6g00816 1976 PRINTS Disease resistance protein signature 175 190 - -
Rops6g00816 1976 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1455 1648 - -
Rops6g00816 1976 Gene3D Ribonuclease Inhibitor 778 1167 IPR032675 -
Rops6g00816 1976 Pfam NB-ARC domain 308 416 IPR002182 GO:0043531
Rops6g00816 1976 Pfam NB-ARC domain 157 281 IPR002182 GO:0043531
Rops6g00816 1976 Gene3D - 336 417 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00816 Rops-Chr6 20857453 20874654 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00816 173 502 WRKY Transcription Factor Family AT5G45050 25.507 6.98e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00816 - - psat:127076002 1822.75