Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00805 ATGGCCGATTTGAACGGCGCCTATTACGGCCCCTCCGTTCCGCCGCCAAAATCCTACCGCCGCCCAAGCCGTGGCGGAGGTGGCTGCTGCGGCGGCTGTTTCAGCTGTTGCTGCGGCTGCATCTTCAATTGCATCTTCGGCCTCATATGCAAACTATTAACCACAATCATCATCATCGTAGGCATCATCGCCTTACTCTTCTGGTTCATCGTGCGGCCCAACGTTGTTAAGTTTGAAGTGACCGATGCTACACTCACGCAATTCAACTACACCAACAACACCCTTCACTACAACCTCGCCTTGAACATAACGGTTCGTAACCCCAATAGGAGGGTGGGGATCTACTACGATTACATCGAAGCGAGCGCGTGGTCCCATGATGTTAGGTTTGGTTACCAGACACTGGGAACGTTCTTTCAGCACCATAAGAATACCAGTTTGTTGAGCCCTGTTTTCAAAGGTCAACAAGTGATGCCTCTCAACAAAGACCAGACTTCGGAGCTGAACGATGAGAAGAGTTCTGGGGTTTACCATATTGATGTGAGGATGTTCCTTAAGGTTAGATTCAAGTTGGGTTTGTTCAAGACAGGGAAGGTCAAGCCCAAGGTTCGTTGTGATTTGCAGGTTCCTCTGAAATCGCATAACGGAACCTCGTCGGGTACTGCGTTTCAAGCTACCAAGTGCGATTGGGATTACAGATGGTTGAGGATTCATTAG 717 0.4951 MADLNGAYYGPSVPPPKSYRRPSRGGGGCCGGCFSCCCGCIFNCIFGLICKLLTTIIIIVGIIALLFWFIVRPNVVKFEVTDATLTQFNYTNNTLHYNLALNITVRNPNRRVGIYYDYIEASAWSHDVRFGYQTLGTFFQHHKNTSLLSPVFKGQQVMPLNKDQTSELNDEKSSGVYHIDVRMFLKVRFKLGLFKTGKVKPKVRCDLQVPLKSHNGTSSGTAFQATKCDWDYRWLRIH* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00805 238 PANTHER OS05G0367900 PROTEIN 49 214 IPR044839 GO:0098542
Rops6g00805 238 Pfam Late embryogenesis abundant protein 102 205 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00805 Rops-Chr6 20661882 20662838 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00805 70 220 SNARE and Associated Proteins AT1G32270 38.158 2.48e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00805 - - aprc:113873272 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03544 8 75279583 75280227 Rops6g00805 6 20661882 20662838 PCT