Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00804 ATGGCTGATTTCATTGGTGTCAATTATGGTACCTCCATTCCGCCGTCACCAAAACCCTATCGCGGCCCAGGCTGCGGCGGCTGTCACGGTTGTTTCAGCAGCTGTTGCAGCTTCTTCTTCAATTGCATCCTCGGCGTCATATGCAATCTAGTAGCCTCCATTGTCCTCATCGGTGTAATCGTCTCACTCTTCTGGCTCATTGTACGACCCAACATGATGAAATTTCACGTGACCAATGCCACAGTAACCCAATTCAACTACACAAACAACACCCTTCACTACAACCTCACCTTAAACATATCAATTCGTAACCCCAACGAGAGGGTGGGAATCTACTACGATTACATCGAAACGAGCGCGTGGTACCATGATGTTAGGTTTGGTTACCAGACACTGGGAACGTTCTTCCAGAACCATAAGAACACAAGCGTGTTGAGCCCTGTTTTCAAAGGTCAACAAGTGATGCCTCTAAACAAAGACCAGACTTCGGAGCTGAATGATGATAACAGGTCTGGGGTTTACAACATTGATGTGAGGCTGTACCTTACGGTTAGATTCAGGTTTGGTTTTTTAAAGACAGTGAAGGTGAAGCCCAAGCTTAGTTGTGACTTGCGGGTTCCTTTGAAATCACACAACGGAACTGAATTTCAAACCACTGAGTGCGATTGGGATTATAGATGGTTGAGGATTCCCATCATCACAACCCCAAAATAA 714 0.458 MADFIGVNYGTSIPPSPKPYRGPGCGGCHGCFSSCCSFFFNCILGVICNLVASIVLIGVIVSLFWLIVRPNMMKFHVTNATVTQFNYTNNTLHYNLTLNISIRNPNERVGIYYDYIETSAWYHDVRFGYQTLGTFFQNHKNTSVLSPVFKGQQVMPLNKDQTSELNDDNRSGVYNIDVRLYLTVRFRFGFLKTVKVKPKLSCDLRVPLKSHNGTEFQTTECDWDYRWLRIPIITTPK* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00804 237 Pfam Late embryogenesis abundant protein 99 202 IPR004864 -
Rops6g00804 237 PANTHER OS05G0367900 PROTEIN 47 210 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00804 Rops-Chr6 20644673 20645386 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00804 67 208 SNARE and Associated Proteins AT1G32270 38.462 2.60e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00804 - - aprc:113873272 274.633