Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00803 ATGGCTGATAAGCAACCCCAACTGAACGGTGCTTACTACGGACACTCCATTCCTCCGGCGGAGCAACCCCGCCGTCACCACCACCACCGTGGCAGAAGATGCTGTTGCTGCCTCTTCGGCATATTCTGGAAGCTCATCGTCGCAATCATCGTAATCATTGGCCTTGCATTCCTCCTCTTCTGGCTCATAGTCCAACCACACGCCTTCAAGTTCAACGTCACAGAAGCCAAACTCACCGAATTCAACTACACCACCACCACCAACAACAACAACAAAAACACCCTCCACTACAACCTCGTACTCAACTTCACGGCACGTAACCCCAACAAGAAGCTCAACATCTACTACGACAAAGTGGAGTGCCACGCGTTCTACGAGGGTACGAGGTTCGCTTCAACGGATGTGATCACGTGGCAGAACTCGTTCCGACAATTCACGAAGAGCACTGACCGAATGAGTGGTGTTTTAAAGGGTGAACGTGTGATGGTGCTTAGGGTCTCTGATATCGAATTTGATAAGAGAAATGGGATTTTTGATATTGATTTGAAGCTCTACTTCACGATTAGGTTCAGGCTTGGTGACACCATAGGTAGTGACACCAAGGCAAATGCTAAGTGTGAGCTTAAGGTTCCTTTCGGTTCTAATGGGAAAACGGTGACTGCGTTTGAACCCACCAAGTGCGATGTCAATTTCTGA 696 0.4871 MADKQPQLNGAYYGHSIPPAEQPRRHHHHRGRRCCCCLFGIFWKLIVAIIVIIGLAFLLFWLIVQPHAFKFNVTEAKLTEFNYTTTTNNNNKNTLHYNLVLNFTARNPNKKLNIYYDKVECHAFYEGTRFASTDVITWQNSFRQFTKSTDRMSGVLKGERVMVLRVSDIEFDKRNGIFDIDLKLYFTIRFRLGDTIGSDTKANAKCELKVPFGSNGKTVTAFEPTKCDVNF* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00803 231 Pfam Late embryogenesis abundant protein 103 195 IPR004864 -
Rops6g00803 231 PANTHER OS05G0367900 PROTEIN 33 214 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00803 Rops-Chr6 20640918 20641882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00803 63 218 SNARE and Associated Proteins AT1G32270 27.950 1.17e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00803 - - gmx:100795302 274.633