Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00800 ATGGGGATACCAGAAGCCATGGATTCTCTCAGGCAAAGAGCAGCATTCGTGAAGGAATCGCTGCAAAAGAGCCAAACCATCACCGATAACATGGTCTCTATTCTCGGTTCCTTCGATCACCGCCTCTCCGCACTCGAAACCGCAATGCGTCCCACTCAGATAAAAACGCATTCGATTCGAAGTGCGCATGATAATATTGACAAGACTCTCAAGGCAGCAGAGGTGATTTTGACGCAATTCGATCAGACTCGCAAGGCAGAGGCTAAAATACTGCGAGGGCCACATGAGGATCTAGAAAGCTATTTAGAAGCAATTGATCAGCTGAGAGCTAATGTGAGTTTCTTTAGTAATAAAAAGAGTTTCAAAAGTAGTGAGGCTATCATCAACCATGCCAACAACTTGCTTGCTAAAGCTATCTCAAAGCTGGAAGACGAGTTCAGACATCTTTTGACAAATTACAGCAAGCCTGTGGAGCCTGACCGCCTTTTTGACTGCTTACCGAACTCTCTAAGGCCATCAAATGATGGTGGTAGCAAAAACCATTCTGAAAAACAAAGCCAGGAAGCTGTCACTTTCACACTTCCAACCCTCATTCCACCCAGAGTTATACCTTTGCTACATGATTTAGCACTGCAAATGGTTCAAGCTGGCCATCAACAACAGCTCTTTCGAATCTACAGAGACACCCGTGCTGCAGTGGTGGAACAGAGTCTTAGGAAATTAGGTGTAGAAAGGCTGAGTAAGGATGACGTTCAAAAAATGCAATGGGAGGTTTTAGAGGCTAAGATTGGGAACTGGATTCATTACATGAGGATTGCTGTCAAATTGTTGTTTTCTGGGGAAAAGAAGATCTGTGATCAAATATTTGATGGTGTTGATTCTTTGAGAACTCAATGTTTTGCTGAAGTCACTGCTAGCAGTGTGGCTATGCTTCTGAGTTTTGGAGAGGCTATTGCCAAAAGCAAGAGGTCACCTGAAAAATTATTTGTTCTTCTAGACATGTATGAGATAATGAGAGAAGTTCAACCAGAGATTGAGAAACTTTTTGAGAGTAAAGCTTGCACTGAAATGCGGGAAGCTGCAACAAGTTTGACCAAACGACTAGCTCAGACAGCCCAAGAAACCTTTGGTGACTTTGAGGAAGCAGTTGAAAAAGATGCTACTAAAACGGCTGTCCTAGATGGAACTGTCCACCCTCTAACTAGCTATGTGATCAATTACGTGAAGTTTCTCTATGATTATCAAGCAACTCTGAAACAACTTTTTCAAGAGTTTGATCCTGGCGATCCAGAAGCTCAGTTAGCATCTGTTACAACAAGGATAATGCAGGCTCTCCAGAATAATCTAGATGGAAAGTCAAAACAATATAAAGACCCATCGTTAACCCAGTTGTTTCTTATGAACAATATCCATTACATAGTGAGATCTGTGAGAAGGTCAGAGGCAAAGGACATGTTGGGGGATGATTGGGTACAAATACACAGAAGAATTGTGCAACAGCATGCAAACCAATATAAAAGGATCTCTTGGGCAAAGATTTTGCAGTGCCTCACTGTCCAAGGAGCTAATTCATCTGGTGGAGGGGACAGCAACAGTGGAGTTTCAAGAGCAATGATTAAAGATAGGTTCAAGACCTTTAACATTCAAATTGAGGAGCTTCATCAGAGACAATCTCAATGGACTGTTCCGGATAGTGAGTTGCGTGAATCACTTCGACTGGCTGTTGCTGAGGTTCTGTTGCCTGCCTATAGATCTTTCCTTAAACGTTTTGGGCCCATGATTGAGAATGGAAAAAATCCTCAGAAGTACATCAGATACTCTCCGGAGAATCTTGAGCAAATGCTGGGTGAATTTTTCGAGAGCAAGACGTGGGGTGAACAGAAGCGGTGA 1890 0.428 MGIPEAMDSLRQRAAFVKESLQKSQTITDNMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEVILTQFDQTRKAEAKILRGPHEDLESYLEAIDQLRANVSFFSNKKSFKSSEAIINHANNLLAKAISKLEDEFRHLLTNYSKPVEPDRLFDCLPNSLRPSNDGGSKNHSEKQSQEAVTFTLPTLIPPRVIPLLHDLALQMVQAGHQQQLFRIYRDTRAAVVEQSLRKLGVERLSKDDVQKMQWEVLEAKIGNWIHYMRIAVKLLFSGEKKICDQIFDGVDSLRTQCFAEVTASSVAMLLSFGEAIAKSKRSPEKLFVLLDMYEIMREVQPEIEKLFESKACTEMREAATSLTKRLAQTAQETFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLYDYQATLKQLFQEFDPGDPEAQLASVTTRIMQALQNNLDGKSKQYKDPSLTQLFLMNNIHYIVRSVRRSEAKDMLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQGANSSGGGDSNSGVSRAMIKDRFKTFNIQIEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPMIENGKNPQKYIRYSPENLEQMLGEFFESKTWGEQKR* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00800 629 Coils Coil 98 118 - -
Rops6g00800 629 MobiDBLite consensus disorder prediction 166 186 - -
Rops6g00800 629 PANTHER EXOCYST COMPLEX PROTEIN EXO70 57 620 IPR004140 GO:0000145|GO:0006887
Rops6g00800 629 SUPERFAMILY Cullin repeat-like 76 620 IPR016159 -
Rops6g00800 629 Pfam Exo70 exocyst complex subunit 265 616 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops6g00800 629 Gene3D Exocyst complex component Exo70 74 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00800 Rops-Chr6 20575297 20583281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00800 1 629 EXO70 exocyst subunit family AT5G52340 79.968 0.0 1052
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00800 K07195 - gmx:100779774 1106.66