Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00798 ATGGTCGAGATCATGGAGTGCATGAAGAAGCTCATAAGTGGCCAGCGTGTTCAAGTCCCCATTTATGACTTCAAGAAGCACCAACGCTCTTCTGATAGTTTTCGTCAGGTCAATGCCTCGGATGTCATTACCTTGGAGGGAATTCTTGTATTCCATGAGCAAGGTTTCAGGGATCTGATGAACATGAAAATCTTTGTTGACACAGATGCTGATGTGCGGCTTGTTCGTAGAATTAGACGTGACACAGTGGAGAAGGGCAGGAATATAAACTCTACCTTGCTCCAGTTGCAAAGCGATGACGATATTCCAACAGAAGCTTACCCAAATGAAAGTAGTGATAAGTACATAGATAAACTGTTTGAGTTCGATGAAATGCCTAAATACAGAACCATCTCCAAGCTGTTGAAAACTGAACAAGAACCTGAGGAGTTATCCCCGGGAAAGCAAGCTAGGAAGATTGCAGTTGAGAATGCTTTGAAGAAATTAAAGAAAGGTCCATATGGGAGGTATACTAATGCATGGGAGGTTATGAGTGATTTAGATATTCTAATTGGAGCATTTGAAAATGTTGTTTCAGGACCAGAGTATGCAGAGCTTAGACAAGGAAGACCCCATGCAGACTTGGACTGCACCCATCACCAACTCACGCCTCTCTCCAGAATGTGTGTGATGCGTTTTGTAACATGCTGCAGCATGCATGTGGCCCTCAAACTGCACCCAACAGGTTCATGTCCAGGCAAGGGTGGGTTGCATCACCGAGAAGGAAGAGCAGCAGGAGATAGGGATTCCACGATTTCAACGTCAGCATAG 810 0.4457 MVEIMECMKKLISGQRVQVPIYDFKKHQRSSDSFRQVNASDVITLEGILVFHEQGFRDLMNMKIFVDTDADVRLVRRIRRDTVEKGRNINSTLLQLQSDDDIPTEAYPNESSDKYIDKLFEFDEMPKYRTISKLLKTEQEPEELSPGKQARKIAVENALKKLKKGPYGRYTNAWEVMSDLDILIGAFENVVSGPEYAELRQGRPHADLDCTHHQLTPLSRMCVMRFVTCCSMHVALKLHPTGSCPGKGGLHHREGRAAGDRDSTISTSA* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00798 269 Gene3D - 1 135 IPR027417 -
Rops6g00798 269 MobiDBLite consensus disorder prediction 243 269 - -
Rops6g00798 269 PRINTS Uridine kinase signature 71 81 - -
Rops6g00798 269 PRINTS Uridine kinase signature 14 29 - -
Rops6g00798 269 PRINTS Uridine kinase signature 85 96 - -
Rops6g00798 269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 95 IPR027417 -
Rops6g00798 269 Pfam Phosphoribulokinase / Uridine kinase family 4 94 IPR006083 GO:0005524|GO:0016301
Rops6g00798 269 PANTHER GLUTAMYL-TRNA (GLN) AMIDOTRANSFERASE SUBUNIT C 97 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00798 Rops-Chr6 20304413 20305766 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00798 3 95 PRT Gene Family AT5G40870 73.118 1.05e-39 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00798 - - ahf:112749895 206.838