Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00797 ATGATGTTGCTGGAGTTTCTTGGTGGGTTGAATTATCCTTCAAATCTGGTTAATTCATGGAGTGGTAATAACCCATGTGATGGGCCATGGCTGGGAATAAAGTGCAATGGCAATGGAAAGGTGTCAATGATTATTTTGTCTAACTTTAATCTCAATGGTACTTTAAGTCCTTCTGTTGCAAACTTAGATTCTCTTGTTGAAATCAGCAAAAGCTTGAAACTTGTGATTGATGGGAATCCTCAGTTAGTTCATGGCAGCTCTGCAATTCCTCCATCAGGGACTGGTTCGTCATCTGGAAAGACTAGACCTTCTCCTGATAATCCATCAGCAGAGTCAAATTCCAATTCCAGTAATTCTCTCGAATCAAATCATCCCAAGAGGAAAAGCTTGGTTTCAATTGTAGCTCCTATTGCAGGTGTTGCAGCTGCAGCTTTTCTGCTCATTCCCCTTTATGTATATTGTTTCAGGAGGAGAAAGGTTGCCTCTGAGGGTTCAAGTTCACTGGTAATTCACCCTAAAGATCCATCTGATTCAGACAATGTTGTGAAGATTGTTGTTGCTAACAATAGCAATGGAATCATTTCCACAGTAACAGAATTGATAGAGCCGTTGACCGTGCTTTGTTACATTGAATTCATGGCTGTTAATAAATGTATTTCAGTTACCGGAAAAATCACTACTAAAGCAGATGTTTTCAGTTTTGGTGTTGTGCTAATGGAACTGATAACCGGATTAATGGCACTTGATGAGAATCGACCAGAGGAAAGCCAATACTTGACAGCATGGTTCTGGCATATAAAATCAGATAAGGAGAAGCTAATGGCTGCTATTGACCCAGCCCTTGACATAAAGGAAGAAACATTTGATAGCATCTCCATCATTGCTGAATTAGCCGGGCACTGCACTGCCAGAGAACCATACCAACGGCCGGATATGGGTCATGCTGTGAATGTTCTGGCACCTCTTGTTGAAAAAATGGAAACCATTAGATGA 993 0.4089 MMLLEFLGGLNYPSNLVNSWSGNNPCDGPWLGIKCNGNGKVSMIILSNFNLNGTLSPSVANLDSLVEISKSLKLVIDGNPQLVHGSSAIPPSGTGSSSGKTRPSPDNPSAESNSNSSNSLESNHPKRKSLVSIVAPIAGVAAAAFLLIPLYVYCFRRRKVASEGSSSLVIHPKDPSDSDNVVKIVVANNSNGIISTVTELIEPLTVLCYIEFMAVNKCISVTGKITTKADVFSFGVVLMELITGLMALDENRPEESQYLTAWFWHIKSDKEKLMAAIDPALDIKEETFDSISIIAELAGHCTAREPYQRPDMGHAVNVLAPLVEKMETIR* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00797 330 Gene3D Transferase(Phosphotransferase) domain 1 177 329 - -
Rops6g00797 330 MobiDBLite consensus disorder prediction 84 123 - -
Rops6g00797 330 SUPERFAMILY Protein kinase-like (PK-like) 212 319 IPR011009 -
Rops6g00797 330 PANTHER OSJNBA0070M12.3 PROTEIN 2 191 - -
Rops6g00797 330 Gene3D Ribonuclease Inhibitor 1 126 IPR032675 -
Rops6g00797 330 Pfam Leucine rich repeat N-terminal domain 3 36 IPR013210 -
Rops6g00797 330 FunFam Leucine-rich repeat receptor-like kinase 1 82 - -
Rops6g00797 330 MobiDBLite consensus disorder prediction 85 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00797 Rops-Chr6 20205938 20207958 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00797 212 319 Receptor kinase-like Gene Family AT5G56890 37.963 1.61e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Rops6g00797 LRRNT_2 9.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00797 - - gmx:100305366 201.445