Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00795 ATGTGTGAAGCGTGTTACAAGACGAGGATGACACGAATTGATATAGGTTTTCATTTGTGTGTTAACGATGAGGTGACGATTAGGTTCCGTTCAACGGCGGGACCTATTTCCCAGCCGGAGAAAGTGATGAACAAGTTGTTCAAGAAACATTCCAAGCAGTTTTGGTTTCAAGGTGCGTTACCACCTAAGAGGGATCTGAATCTATTCGTGAAGTGGCCGAAGACAACTCACTTGCAACATATGAAGAGGATCCTAAAACAGAGGCTTAAGGTTCCACCAGCATTGAACCTGTTCACCAAGACACTAGACAAGAATCTCGTAAGGGACCTTTTTTAG 336 0.4375 MCEACYKTRMTRIDIGFHLCVNDEVTIRFRSTAGPISQPEKVMNKLFKKHSKQFWFQGALPPKRDLNLFVKWPKTTHLQHMKRILKQRLKVPPALNLFTKTLDKNLVRDLF* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00795 111 Gene3D - 72 111 IPR029064 -
Rops6g00795 111 PRINTS Ribosomal protein L7A family signature 51 68 IPR001921 -
Rops6g00795 111 PRINTS Ribosomal protein L7A family signature 88 107 IPR001921 -
Rops6g00795 111 PRINTS Ribosomal protein L7A family signature 68 85 IPR001921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00795 Rops-Chr6 20188015 20188915 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00795 38 111 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 67.568 7.82e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00795 K02936 - mnt:21393446 113.62