Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00762 ATGGGAAACAACTGTTTTGGATCGAAAATCTCTTCTTCTAAGGATGGATCATCAACCTCTACTTTTTCAAGTTCATTCTGGTGGTCACGTTCAAAGAACAAAGAGGCTTCTCATGCACACAAAGGTGCACATGCGAGCAAAAATTCAAAAGCTACAGAAGATGTTCAACACAAGCCTCCAGAGGTAGTGAAAATTGACAAGGAAGATGTGAAGAAACCTCAATCAAAAGAAACCAAACCATCCTCAGAACCAATGAGGCAAGTGGAAGGTGCTAGAAAGCCAAAGGAAGAGGCAACACGAGGGAATCATGCAAAACAAAAGAGGCCCCACAACGTGAAGAGGCTAGCAAGTGCAGGGCTTAAAACAGATTCAGTTTTGATGAGAAAAACAGATAATCTTAAGGAGTTTTATAATCTGGGGCAGAAGCTAGGACAAGGTCAATTTGGAACTACTTTCCTTTGTGTGGAGAAAGCTACTGGGAAAGAGTATGCTTGCAAGTCCATCTTGAAGAGAAAACTGTTGACACATGAGGATGTGGAGGATGTGAGGAGGGAGATTCAGATAATGCACCATTTGGCAGGGAGTCCTAATGTGATCTCCATTAAGGAGGCTTATGAGGATGGTGTTTCTGTTCATGTTGTCATGGAATTGTGTGCAGGGGGTGAACTGTTTGATAGGATTGTAGAAAGAGGGCATTACACAGAAAGAAAAGCTGCTAGACTTGCAAGGACTATAGTAGGTGTTATTGAGTCTTGCCATGCCCTTGGAGTAATGCATCGTGATCTTAAGCCTGAGAATTTTCTTTTCGTCAATGAGCAGGAAGATTCCCCTCTTAAGGCAATAGATTTTGGACTGTCTGCTTTTTTCAAACCAGGTGAAATTTTCAATGATGTGGTGGGAAGTCCTTATTATGTTGCACCTGAAGTTCTACGCAAGCGTTATGGCCCAGAAGCAGATGTGTGGAGTGCTGGTGTTATCTTATACATTCTCTTAAGTGGGGTGCCTCCATTTTGGGGTGAATCGGAGCAAGAGATATTTGAGGCCATTTTGCATAATGATCTTGATTTCTCATCAGAACCCTGGCCTAGTATCTCTAAAAGTGCAAAAGACTTGGTTACCAAGATGCTTGTCAGAGATCCAAGGAAACGGATAACAGCTTATGACGTTCTTCGTCACCCCTGGATTCAGGTTGATGGAGCAGCCCCTGACAAGCCTCTTGATTCAGCAGTTTTGAGTCGCCTGAAGCAGTTTTCGGCAATGAACAAGCTCAAGAAAATGGCTCTTAGAGTTATTGCAGAGAATCTCTCTGAAGAGGAAATTGCTGGATTGAAAGAAATGTTTAAGATGATAGACACAGACAATAGTGGTCAAATTACTTTTGAAGAACTCAAGATTGGACTGAAAAAATTTGGTGCTAATCTCAATGAATCTGAAATTTACGATCTCATGCAAGCTGCAGATGTTGATAACAGTGGCACAATTGACTATGGAGAATTCATAGCAGCAACATTGCATTTAAACAAAATTGAGAGGGAAGATCATTTAGCGGCAGCTTTCTCATTTTTTGATAAAGATGGAAGTGGCTTTATCACTCAAGATGAGCTTCAAAGAGCTTGTGAAGAATTTGGCATGGGGGATGCCATGTTGGAGGAAATGATGCGAGAAGCTGATCAAGATAATGATGGGCGAATAGACTACAATGAATTTGTGGCTATGATGCAGAGAGGCAATGCAGATATGGGTAATAAAAGGGGTCGAAAAATTAGCAGTAGTTTTAGCATTAGATTTAGGGAGGCACTACCAGTATGTTAA 1812 0.4145 MGNNCFGSKISSSKDGSSTSTFSSSFWWSRSKNKEASHAHKGAHASKNSKATEDVQHKPPEVVKIDKEDVKKPQSKETKPSSEPMRQVEGARKPKEEATRGNHAKQKRPHNVKRLASAGLKTDSVLMRKTDNLKEFYNLGQKLGQGQFGTTFLCVEKATGKEYACKSILKRKLLTHEDVEDVRREIQIMHHLAGSPNVISIKEAYEDGVSVHVVMELCAGGELFDRIVERGHYTERKAARLARTIVGVIESCHALGVMHRDLKPENFLFVNEQEDSPLKAIDFGLSAFFKPGEIFNDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLSGVPPFWGESEQEIFEAILHNDLDFSSEPWPSISKSAKDLVTKMLVRDPRKRITAYDVLRHPWIQVDGAAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAENLSEEEIAGLKEMFKMIDTDNSGQITFEELKIGLKKFGANLNESEIYDLMQAADVDNSGTIDYGEFIAATLHLNKIEREDHLAAAFSFFDKDGSGFITQDELQRACEEFGMGDAMLEEMMREADQDNDGRIDYNEFVAMMQRGNADMGNKRGRKISSSFSIRFREALPVC* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00762 603 Gene3D - 402 579 - -
Rops6g00762 603 ProSiteProfiles EF-hand calcium-binding domain profile. 510 545 IPR002048 GO:0005509
Rops6g00762 603 FunFam Calcium-dependent protein kinase SK5 223 407 - -
Rops6g00762 603 FunFam Calcium-dependent protein kinase 1 139 222 - -
Rops6g00762 603 ProSitePatterns EF-hand calcium-binding domain. 451 463 IPR018247 -
Rops6g00762 603 SUPERFAMILY Protein kinase-like (PK-like) 136 396 IPR011009 -
Rops6g00762 603 ProSitePatterns Protein kinases ATP-binding region signature. 143 170 IPR017441 GO:0005524
Rops6g00762 603 CDD STKc_CAMK 136 394 - -
Rops6g00762 603 SMART serkin_6 137 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00762 603 Gene3D Transferase(Phosphotransferase) domain 1 223 401 - -
Rops6g00762 603 Pfam Protein kinase domain 137 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00762 603 FunFam Calcium-dependent protein kinase 1 403 577 - -
Rops6g00762 603 ProSiteProfiles EF-hand calcium-binding domain profile. 474 509 IPR002048 GO:0005509
Rops6g00762 603 ProSiteProfiles Protein kinase domain profile. 137 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00762 603 SMART efh_1 478 506 IPR002048 GO:0005509
Rops6g00762 603 SMART efh_1 442 470 IPR002048 GO:0005509
Rops6g00762 603 SMART efh_1 548 576 IPR002048 GO:0005509
Rops6g00762 603 SMART efh_1 514 542 IPR002048 GO:0005509
Rops6g00762 603 ProSitePatterns EF-hand calcium-binding domain. 487 499 IPR018247 -
Rops6g00762 603 SUPERFAMILY EF-hand 424 575 IPR011992 -
Rops6g00762 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Rops6g00762 603 ProSiteProfiles EF-hand calcium-binding domain profile. 546 579 IPR002048 GO:0005509
Rops6g00762 603 CDD EFh 514 574 IPR002048 GO:0005509
Rops6g00762 603 MobiDBLite consensus disorder prediction 1 112 - -
Rops6g00762 603 MobiDBLite consensus disorder prediction 33 104 - -
Rops6g00762 603 Gene3D Phosphorylase Kinase; domain 1 139 222 - -
Rops6g00762 603 MobiDBLite consensus disorder prediction 1 32 - -
Rops6g00762 603 ProSitePatterns EF-hand calcium-binding domain. 523 535 IPR018247 -
Rops6g00762 603 ProSitePatterns EF-hand calcium-binding domain. 557 569 IPR018247 -
Rops6g00762 603 Pfam EF-hand domain pair 443 503 IPR002048 GO:0005509
Rops6g00762 603 Pfam EF-hand domain pair 513 574 IPR002048 GO:0005509
Rops6g00762 603 PANTHER SERINE/THREONINE-PROTEIN KINASE 121 569 - -
Rops6g00762 603 ProSiteProfiles EF-hand calcium-binding domain profile. 438 473 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00762 Rops-Chr6 19526990 19532090 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00762 1 597 EF-hand Containing Proteins AT3G10660 65.948 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops6g00762 Pkinase 5.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00762 K13412 - gmx:100800415 960.288