Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00758 ATGGTGCAGTTTGGTGGTGCAGTTTCAACAACCTCTATCTCCCTCTCCTTGAGTGTTAATATGATGAGTGGAGACAGCTCAAAACCAGTCTTCAAAGGTTATGGGTTTGCACCATATGGACCATATCCACCACCCAGTTCTTCTCCATCCATGCAACATGATGGAGAAGTATGTAAAGATATTGTCGGTAGTGCATATTACGTTGCACCTGAGGTCTTGGAGAGGAAATATGGGCCAGAAGTAGACATTTGGGGTATTAGAGTTGTGTTATACATTCTTCTACTCGGTGTTCCTCCATTCTGGGCAGAATCCGAAAGTGGGTTATTCAAAGTCATCCTGCAAGGCCACGTCGACTTCACTAGCAATCCATGGCCCTCCATATCACCTGCAACAAAAGATATGGTAAGTCAGATCCCAAGCAAAGGCTGA 429 0.4499 MVQFGGAVSTTSISLSLSVNMMSGDSSKPVFKGYGFAPYGPYPPPSSSPSMQHDGEVCKDIVGSAYYVAPEVLERKYGPEVDIWGIRVVLYILLLGVPPFWAESESGLFKVILQGHVDFTSNPWPSISPATKDMVSQIPSKG* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00758 142 Gene3D Transferase(Phosphotransferase) domain 1 21 141 - -
Rops6g00758 142 PANTHER SERINE/THREONINE-PROTEIN KINASE 44 137 - -
Rops6g00758 142 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00758 142 Pfam Protein kinase domain 56 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00758 142 SUPERFAMILY Protein kinase-like (PK-like) 51 138 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00758 Rops-Chr6 19463090 19463728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00758 55 138 EF-hand Containing Proteins AT5G12180 75.000 2.53e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops6g00758 Pkinase 2.5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00758 K13412 - sind:105171144 144.436