Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00713 ATGAGTCCCCACTCTCCCTCCTTTTATAGGACCCACCACACCTTTCACTCCACAACAACAATCACACCCTCTTCATCCCCTTTCCTCCATTGTCTCCCTCTTCTCTTCTCCCACTTCACAACACAAACACAACATACTCCTCTCATTCTTCTCCATCTTCATCACTCACTCATGGACAAGATCACTGAGAGAGAGACCCATGACTTCATGAACGTTGAGTCTTTCTCTCAACTCCCCTTCATAAGCCGCACACCCACCACCACCATCAAAGAAAGAGGCATTCGCCTCTTTGGCAAAGAATTTGGTGGTGGAGAATCAGAATCAACTGAAACAACAACCACCAACGAGGTTGATAGCAATAACAAGGACAACAACAGCACCGAGAACAATGGAGGAGAGAGTAGCCGCAGGTTTGAATGTCACTACTGTTGCAGAAACTTCCCAACTTCACAAGCCTTAGGTGGTCACCAAAACGCACACAAAAGAGAACGCCAACATGCCAAACGAGCACACCTTCAGTCAACCATGGTTCACGGTAGCACTTTCTCAGAACCTCACCATCATCATCATCAACTTTATCCCTCAATGAACTACAGGTTCACCTCAGCTCCAACAACACCAATGCCTTCTTATCATCCAACATGGAACAACAACATCAACAATAATGTTAACTCTCCAAGTAATGCCATCACCACAAGTGGTGGAAGGTTCTATGGAACCTCTTATTCTCACCATCACCACCACCGCCGCCAACAACAACAACAACCCATCAATGGTAGCCCTTTAGCCTTTTGGCGAATCCCAAATGGTGCCGTTCAGAGTAACCCTACTTTTGACCATGAACGCTCCTTGCAGCAGCACCATCATCCCTTGCCCTTGTTTGCTGGTGAGGAAATGAACAACGTTAGAGCCTCTCAGATTGGAACTTCTTCTGCTTCTCAAAACCGCTACCTTTATGATTCCAAACGTAGTAGTGTCCATGACCAAGTGAGTTTGGATCTTCATCTGTAA 1011 0.4619 MSPHSPSFYRTHHTFHSTTTITPSSSPFLHCLPLLFSHFTTQTQHTPLILLHLHHSLMDKITERETHDFMNVESFSQLPFISRTPTTTIKERGIRLFGKEFGGGESESTETTTTNEVDSNNKDNNSTENNGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSTMVHGSTFSEPHHHHHQLYPSMNYRFTSAPTTPMPSYHPTWNNNINNNVNSPSNAITTSGGRFYGTSYSHHHHHRRQQQQQPINGSPLAFWRIPNGAVQSNPTFDHERSLQQHHHPLPLFAGEEMNNVRASQIGTSSASQNRYLYDSKRSSVHDQVSLDLHL* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00713 336 ProSitePatterns Zinc finger C2H2 type domain signature. 140 160 IPR013087 -
Rops6g00713 336 ProSiteProfiles Zinc finger C2H2 type domain profile. 138 165 IPR013087 -
Rops6g00713 336 MobiDBLite consensus disorder prediction 241 264 - -
Rops6g00713 336 MobiDBLite consensus disorder prediction 98 135 - -
Rops6g00713 336 MobiDBLite consensus disorder prediction 105 133 - -
Rops6g00713 336 PANTHER ZINC FINGER PROTEIN GIS 58 336 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00713 Rops-Chr6 18522596 18523752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00713 58 336 C2H2 Transcription Factor Family AT3G58070 39.731 5.01e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00713 - - vun:114190818 282.722