Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00699 ATGCATTCGTCTTGGCTAATACAATATCTATTATTATCAGTCATCTTCAGTATCATTGCGCTCACTAATGTTGGCTGCTTTTATTTCAATTTCCCTACCTTCCAACCACAGGATGGACATACTAATTTGTCATTGAGCCAAAACTCAAAAATATATTTAGATGCCATCCAACTAACCCCTAATATTCGTGGTTCAATATTCAATTATTCTGGACGTGCTTTTTACAAAAAGCCATACAAACTTTGGAGCAAGAAGAAGAAGAACCAAACTGCAGATTTCAACACCACTTTTGTGCTCAACATAAATCCTCAAACTTCCCCTGGTGGAGAAGGCTTGGCCTTTATCTTAACTGCAGATACCACTGTCCCAAAAAATAGTGAAGGAAAATGGCTAGGTATTGTGAATGACTCTACCAATGGAACTTCTCAAGCTGGGATTCTAGCAGTGGAGTTTGACACAAGAAAAAGTTTCACTGAAGATGGTCCAGACAACCACGTTGGCATCAACATAAACAGCATCAACTCCATCAAATGGGTCTCATTAGCAAACACTAGGGTCAATATTTCATCTGGTAGAAATGTAACCGTGAGGATTCAGTATGCCAATGATAAAATATCTGTTTTTGGTGCCATGAGTGAAACTGCACAAGATTTTATGGAGACCCTCTTGGTATCTCCACCTCTTAATCTATCTTCCTATCTTCAAGAAGATGTTTATCTTGGTTTCTCAGCTTCAACAAGCAATTACACACAGCTGAACTGTGTAAGAGCATGGGAATTCAACGGTGTAGATATTGCAGATGGTGACAAAAATCTGTTGTGGGTTTGGATCACGGTTGCAATTGTGATTATCATTGGTGGGTTGATGATACTTCTCTTGCTTTGGCAAAGGAAACGTTGGATAGAGAAGCCAGAAGATGCATATCCAAGGATAGAGGATCAGATTCAACACTCCTCTATGGCTCCAAAGAAGTTTCAACTAAGGGAAATCAGAAAAGCAACAGGTGGATTCAACCCTCAAAACAAGCTTGGAGAAGGTGGATTTGGAACTGTTTATAAGGGTCACGTTGGAAACAAGGAGATAGCTGTGAAGAGAGTTTCCAAGAACTCACGTCAAGGGAAGCAAGAATTCATAGCAGAAGTGACAACAATCGGAAGCCTTCACCATAGAAACTTGGTGAAACTCATTGGTTGGTGCTATGAGAGCAAAGATTGTGAAACCAATTGA 1227 0.3985 MHSSWLIQYLLLSVIFSIIALTNVGCFYFNFPTFQPQDGHTNLSLSQNSKIYLDAIQLTPNIRGSIFNYSGRAFYKKPYKLWSKKKKNQTADFNTTFVLNINPQTSPGGEGLAFILTADTTVPKNSEGKWLGIVNDSTNGTSQAGILAVEFDTRKSFTEDGPDNHVGININSINSIKWVSLANTRVNISSGRNVTVRIQYANDKISVFGAMSETAQDFMETLLVSPPLNLSSYLQEDVYLGFSASTSNYTQLNCVRAWEFNGVDIADGDKNLLWVWITVAIVIIIGGLMILLLLWQRKRWIEKPEDAYPRIEDQIQHSSMAPKKFQLREIRKATGGFNPQNKLGEGGFGTVYKGHVGNKEIAVKRVSKNSRQGKQEFIAEVTTIGSLHHRNLVKLIGWCYESKDCETN* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00699 408 Gene3D - 26 270 - -
Rops6g00699 408 Pfam Legume lectin domain 29 266 IPR001220 GO:0030246
Rops6g00699 408 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 261 IPR013320 -
Rops6g00699 408 SUPERFAMILY Protein kinase-like (PK-like) 318 403 IPR011009 -
Rops6g00699 408 FunFam Probable L-type lectin-domain containing receptor kinase S.5 26 269 - -
Rops6g00699 408 ProSitePatterns Protein kinases ATP-binding region signature. 343 364 IPR017441 GO:0005524
Rops6g00699 408 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 310 405 - -
Rops6g00699 408 ProSiteProfiles Protein kinase domain profile. 337 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00699 408 Pfam Protein tyrosine and serine/threonine kinase 340 403 IPR001245 GO:0004672|GO:0006468
Rops6g00699 408 CDD lectin_legume_LecRK_Arcelin_ConA 27 261 IPR001220 GO:0030246
Rops6g00699 408 Gene3D Phosphorylase Kinase; domain 1 322 405 - -
Rops6g00699 408 PANTHER - 55 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00699 Rops-Chr6 17824844 17826070 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00699 29 404 Receptor kinase-like Gene Family AT3G55550 33.167 3.74e-45 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Rops6g00699 Lectin_legB 5.3e-62 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00699 - - gmx:100785031 591.267