Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00693 ATGTTTTCGTGGTTGGCAAGGATAGTTTCTGCGTGCTTGAGACCGGTGAGGCGATATGCACGTATGAGGAAGGATGGTGATTTTGATGGCGCTTCAACCGTTGATGATGCTCTCGTGTGGTGTAGGGACCTTGAGAAACACTCTTGTGGTGAGTTTTCATTCGCAGTGGTTCAGGCCAACGAAATTATTGAGGATCATAGCCAGGTTGAGACTGGTTCTGATGCTGTCTTTGTTGGTGTCTATGATGGCCATGGTGGTCCTGAAGCTTCACGGTTCATCAATGATCACCTCTTCCATAATCTTATGAGGGTTGCAAAAGAAAATGGTTCTATCTCTGAAGATATTATCAGGAATGCTGTTTCTGCTACTGAGGATGGGTTTTTGACTCTTGTTCGAAGGAGCTATGGAATAAAGCCATTGATAGCAGCAATGGGTTCATGTTGTCTGATGGGCGTTATCTGGAAAGGGACACTATATATTGCCAATCTTGGAGACTCTCGTGCTGTAATTGGTTCTGTGGGTGGATCCAACAAGATCATTGCTGAACAGTTGACCAGAGAGCACAATGCTAGCAAAGAGGAGGTTAGACGAGAACTCAAGGCTTTGCATCCGGAAGATTCACAAATCGTAGTTTTGAAGCATGGAACTTGGCGCATTAAAGGCATCATCCAGGTATCTAGATCCATAGGAGATGCATATTTGAAGCGGCCGGAGTTCTCTTTTGATCCTTCATTCCCCCGGTTCCACCTGCCCGAACCTATCCGCCGACCTGTGCTAACAGCAGAACCATCTGTATGTTCAAGAGTTTTACAACCTAATGACAAATTCATCATATTTGCATCTGATGGACTTTGGGAACACTTGACAAATCAGGAAGCTGCTGAGATTGTTCATAACAACCCACGAACTGGGATTGCAAGAAGACTTATTAAGGCTGCTTTAAATGAGGCTGCTAGGAAAAGGGAAATGAGATATAAAGACCTTCAGAAGGTTGAAAAGGGGATTAGGCGATTTTTCCATGATGATATCACAGTGGTTGTTATCTTCATTGACCATGAGTTGCGTGGGAAGAATGTTACAGTTCCTGAGTTGTCCATCAAAGGCTTTCTTGACACGGTTGGACCATCCAATTTTAGAGGTTTCCAGGAAATGAAATGA 1158 0.4404 MFSWLARIVSACLRPVRRYARMRKDGDFDGASTVDDALVWCRDLEKHSCGEFSFAVVQANEIIEDHSQVETGSDAVFVGVYDGHGGPEASRFINDHLFHNLMRVAKENGSISEDIIRNAVSATEDGFLTLVRRSYGIKPLIAAMGSCCLMGVIWKGTLYIANLGDSRAVIGSVGGSNKIIAEQLTREHNASKEEVRRELKALHPEDSQIVVLKHGTWRIKGIIQVSRSIGDAYLKRPEFSFDPSFPRFHLPEPIRRPVLTAEPSVCSRVLQPNDKFIIFASDGLWEHLTNQEAAEIVHNNPRTGIARRLIKAALNEAARKREMRYKDLQKVEKGIRRFFHDDITVVVIFIDHELRGKNVTVPELSIKGFLDTVGPSNFRGFQEMK* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00693 385 ProSitePatterns PPM-type phosphatase domain signature. 77 85 IPR000222 GO:0043169
Rops6g00693 385 SMART PP2C_4 45 348 IPR001932 -
Rops6g00693 385 PANTHER PROTEIN PHOSPHATASE 42 348 IPR015655 GO:0004722|GO:0006470
Rops6g00693 385 CDD PP2Cc 52 350 IPR001932 -
Rops6g00693 385 FunFam Probable protein phosphatase 2C 42 42 358 - -
Rops6g00693 385 Pfam Protein phosphatase 2C 63 319 IPR001932 -
Rops6g00693 385 SUPERFAMILY PP2C-like 57 351 IPR036457 -
Rops6g00693 385 Coils Coil 181 201 - -
Rops6g00693 385 ProSiteProfiles PPM-type phosphatase domain profile. 51 350 IPR001932 -
Rops6g00693 385 Gene3D - 37 358 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00693 Rops-Chr6 17756403 17760633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00693 1 381 PP2C-type Phosphatase Gene Family AT5G06750 70.332 0.0 553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00693 6 17756403 17760633 Rops6g00693 6 17756403 17760633 ECH
Rops6g00693 6 17756403 17760633 Rops2g01244 2 17858053 17866794 ECH