Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00690 ATGAATCTCGTTTATCTCTTCTGTTTGTTGCTCACTGGCCTCTGTTTTTGGCAGGAAAGGAAGATTTCACGACAGGAACTGATACAGAAAGTGAGCCAAATAGCAAGAGATAAGTTGCTGATTGCAGTCATCAAGTCTTTTAGAGCCAAGGGATCTTTGGCTAAATCTCAAGATCCAGCCACTCTTCCTGACAGTGGATCACAGCCGTCTAATCCTTCTCAAATTGGATCTCAGCCCACTTTCAAAGGTATCAAGGAGTCTCGACATCTTGGTTTGGCCGCACCAAGCCGGTGGGATCTTGTTTACGATAAACAAATGATGCAGGAGGAGCACCTCTTCGTAGCAAGGTGCACAAAGATTATAAATCCAAATTCTGAAGATGCCAAATATGTTATCAATGTGAAGCAGATTGCTAAGATTGCTACAATCATAGCAGTATATGCCAACTGGGGTTTTGCAAAAGTCAAAGGAATTGGTTGGGGTCAAGGAGTCAATCCAGCAGAAATTTGCAAGAGAAGAGTTGAAGTTGCAAGGCTTCGTGAGCTTCACACACTTAAGGGACATGTTGAGTCTGTAGTGAAGCTTAAAGGTCTGGACATTGATACAATCCAGCAGCACTACACAGTGTGA 630 0.4317 MNLVYLFCLLLTGLCFWQERKISRQELIQKVSQIARDKLLIAVIKSFRAKGSLAKSQDPATLPDSGSQPSNPSQIGSQPTFKGIKESRHLGLAAPSRWDLVYDKQMMQEEHLFVARCTKIINPNSEDAKYVINVKQIAKIATIIAVYANWGFAKVKGIGWGQGVNPAEICKRRVEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00690 209 MobiDBLite consensus disorder prediction 55 78 - -
Rops6g00690 209 Pfam RCD1-SRO-TAF4 (RST) plant domain 17 48 IPR022003 -
Rops6g00690 209 Gene3D - 165 209 - -
Rops6g00690 209 ProSiteProfiles RST domain profile. 1 53 IPR022003 -
Rops6g00690 209 MobiDBLite consensus disorder prediction 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00690 Rops-Chr6 17734796 17748935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00690 167 209 Primary Pumps ATPases AT3G42640 93.023 5.76e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00690 K03061 - gmx:100820271 91.6633