Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00681 ATGGAAAAAGTTAACAACGTTGGGGGATGGATCGTACGACATTGTTTCCCTTGCTGCAATTGTTGCTCAATCATAGCTGTTAAGAGTTCAAGGCCTAACACGTTAGATTGGTTGCAAAGAGAAAGACGATTATTGGAATCATTCTTTGGATGCAAAGACATTCTTCAATGCATTTGGAGTCAAGTCACCAAAGAGAATGATCATTTAATCTACAATCTTCTCATGGAGTTTGCCCCTTTTGGTTCTCTTGGAGATTTAATAAAGAAGAGACCATTGTGTGAAAATGAAGTGAGAGTTTATACACGTATGCTTCTCAAAGGACTTTATCGCGTCCATCAACATGGAGTTGTTCATTGTGATCTAAAACCAGATAACATCCTTCTCTTTCCTTCATCTGAGTATGGTGCAAAATATCAATTGAAGATAGAAGATTTTGGATTGTCTAGGACTAAAGAAGAAGAGTTTGATGCTGACTTTTGGAAGATCAAGTTCAGAGGGACACCGTTTTACATGTCACCAGAATCTGTTATGGGACAAATTGAAGCACCGTTGGATATATGGTCTCTTGGATGCATAGTAATCGAGATGCTCACAGGGTTACCTGCATGGAAGCTTCGTACTTTGGAGGACTTAATGTTTAAGCTTGCATTCCTAAAAGAAGCACCTATGATACCTAATGAATTGAGTGAGAATTGTAAAGATTTCTTGAATAAGTGTTTTGTGAAGGACCCTAGACAGAGATGGACCGCTGGCATGCTTCTCTACCATCCTTTTCTTGATATTTCTACAAGTGATAGGAGCGGAGATATAAAAAGACCCCCTATGTCTAGTTTTTCATTTTTCTCTTATGATGTTGTTAGGTAA 864 0.3831 MEKVNNVGGWIVRHCFPCCNCCSIIAVKSSRPNTLDWLQRERRLLESFFGCKDILQCIWSQVTKENDHLIYNLLMEFAPFGSLGDLIKKRPLCENEVRVYTRMLLKGLYRVHQHGVVHCDLKPDNILLFPSSEYGAKYQLKIEDFGLSRTKEEEFDADFWKIKFRGTPFYMSPESVMGQIEAPLDIWSLGCIVIEMLTGLPAWKLRTLEDLMFKLAFLKEAPMIPNELSENCKDFLNKCFVKDPRQRWTAGMLLYHPFLDISTSDRSGDIKRPPMSSFSFFSYDVVR* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00681 287 ProSiteProfiles Protein kinase domain profile. 1 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00681 287 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
Rops6g00681 287 Pfam Protein kinase domain 26 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00681 287 Gene3D Transferase(Phosphotransferase) domain 1 20 278 - -
Rops6g00681 287 SUPERFAMILY Protein kinase-like (PK-like) 24 260 IPR011009 -
Rops6g00681 287 SMART serkin_6 1 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00681 287 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 24 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00681 Rops-Chr6 17541638 17542501 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00681 23 287 MAP Kinase Kinase Kinase AT4G36950 41.516 3.09e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Rops6g00681 Pkinase 6.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00681 - - gmx:102667952 360.147