Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00677 ATGGCTGAATGGAAGGCTGAATGGAAGAAGTTAACAACGTTGGGGGAGGGTTCGTACGGCATTGTATCCCAAGCTGCAATTGTTGCCCCACAAGAATTGAGTGGGGATATCATAGCTGTTAAGAGTTCCAAGCCTAATATGTTTTATTCGTTGCAAAGAGAAGGATGCATATTGGAATCATTCTTTGGATGTAAAGAGATTCTTCAATGTATTTGGAGTCAAGTCACTGTTGACAATGATCATTTAACCTACAATCTTCTCATGGAGTATGCCCCTTTTGGTTCACTTGGAGATTTAATAAAGAAGAGACCACTGTGTGAGAATGAAGTGAGAGTTTATACACGTATGCTTCTCAAAGGGCTTTATCGCATCCATCAACATGGAGTTGTTCATTGTGATCTAAAACCTGATAACATCCTTCTCTTTCCTTCATCAGAGTATGGTGTAAAATATCAACTGAAGATAGCAGATTTTGGATTGTCTAGGACTAAAGATGAAAAGTTTAATGCTGACTTTTGGAAGATCAAGTTCAGAGGGACGCCAATTTACATGTCACCAGAATCAGTCATGGGACAAATTGAAGCACCATTAGATATATGGTCTCTTGGATGCATAGTAATCGAGATGCTCACTGGGTCACCCGCATTGAAGCTTCATGCTTTGGCAGACATAATGTTTAAGCTTGCATTCCTAAAAGAAGCACCTATGATACCTAATGAAGTGAGTGAGACTTGTAAAGATTTCTTGAATAAGTGTTTTGTGAAGGACCCTACAAAAAGATGGACCACTGACATGCTTCTCCACCATCCTTTTCTTGATATTTCTACAAGTGATAGGAGCGAAGATATAAAAAGACCCTTTATGTCTAGTTTTTCATTTTTCTCTTATGAGATCGTCACATAA 903 0.3865 MAEWKAEWKKLTTLGEGSYGIVSQAAIVAPQELSGDIIAVKSSKPNMFYSLQREGCILESFFGCKEILQCIWSQVTVDNDHLTYNLLMEYAPFGSLGDLIKKRPLCENEVRVYTRMLLKGLYRIHQHGVVHCDLKPDNILLFPSSEYGVKYQLKIADFGLSRTKDEKFNADFWKIKFRGTPIYMSPESVMGQIEAPLDIWSLGCIVIEMLTGSPALKLHALADIMFKLAFLKEAPMIPNEVSETCKDFLNKCFVKDPTKRWTTDMLLHHPFLDISTSDRSEDIKRPFMSSFSFFSYEIVT* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00677 300 Gene3D Transferase(Phosphotransferase) domain 1 2 293 - -
Rops6g00677 300 ProSitePatterns Protein kinases ATP-binding region signature. 14 41 IPR017441 GO:0005524
Rops6g00677 300 Pfam Protein kinase domain 9 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00677 300 SMART serkin_6 8 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00677 300 SUPERFAMILY Protein kinase-like (PK-like) 7 273 IPR011009 -
Rops6g00677 300 CDD STKc_MAPKKK 7 272 - -
Rops6g00677 300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Rops6g00677 300 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 8 284 - -
Rops6g00677 300 ProSiteProfiles Protein kinase domain profile. 8 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00677 Rops-Chr6 17458390 17459292 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00677 7 282 MAP Kinase Kinase Kinase AT4G36950 40.000 1.25e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Rops6g00677 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00677 - - gmx:102667952 384.415