Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00675 ATGCAAGGAAATCAATGGGAATCTTGCATAAGAAATAACAACTTAACCCAGGTGAGTTTTCAAGCTCAGCAACATGATCAGCATCAGAATGACATTCCTGTTTGGAGTATGGAGTTTCCAACTACAACAGATTCACCCTTTCTATTTTGCCAAGCTTCTGAAGATAACTACTACTCCAAACAAGATCAACCTGCCTCATCTCAATTCTCAAGCTCATTGCAATCGGTTGCAGAATCTTTCATGTCTCGCAGTGAAGATAGTATTTCTTCTTCTGAAAAGTATAGTGAATTTCCTTCTTGTTCTGGAAAATATGGTAATTTTCTGGTTGACAATATGCCATTTTGTGACTACTTCCCACGAGAACATAAGAAGGTGCTCGAGGATGATGCTGCCCCAGATAAGAGGTCCCTTGAGATTTCCTTTCAGAGAACTCAGTGGGCCTCATGTGCAAAGCCAGATAAGCAATCTTCACCTTGTGGCGTTGCTTTTGCAACATGTTGCAACTCTGATTCTAGGAGAACTGCAACTGGTAAAAGAAGAATAAGATGGACAAAAGATCTGAATGAGCCATTTATTATGATTGTTAACCACCTTGGTGGTCCAGAAAGGGCAAAGCCTAAGGCTATATTAGAGATGATGGGTTCAGATGTGCTGAACATTTCTCACGTTAAAAGTCATTTGCAGAAATATCGATCTACATTACACATGCACGAAGCTTTGAAGGAAAGATCTGTTGAAGGACATAGAACAGATGGGATCACTGAGCTTCAAGTCAAAATCCATATGCAAATTGAGGAATCACGGCAACTGCAACTTGAGGTTCAGAGGAACAATCACCAACAACTTGAGATGCTGAGAAATTTGCAAGTGCTAATTGAACAGCAGAGGAAGCAGCTCAAATTAATGTTAGATCACCAAAAACAAAGAACCAAGATGGAGAAAATCCCTGATTCAGAACTTGATGTGATTATGCCACAATGGGATTGA 987 0.4002 MQGNQWESCIRNNNLTQVSFQAQQHDQHQNDIPVWSMEFPTTTDSPFLFCQASEDNYYSKQDQPASSQFSSSLQSVAESFMSRSEDSISSSEKYSEFPSCSGKYGNFLVDNMPFCDYFPREHKKVLEDDAAPDKRSLEISFQRTQWASCAKPDKQSSPCGVAFATCCNSDSRRTATGKRRIRWTKDLNEPFIMIVNHLGGPERAKPKAILEMMGSDVLNISHVKSHLQKYRSTLHMHEALKERSVEGHRTDGITELQVKIHMQIEESRQLQLEVQRNNHQQLEMLRNLQVLIEQQRKQLKLMLDHQKQRTKMEKIPDSELDVIMPQWD* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00675 328 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 173 311 IPR044848 GO:0003700
Rops6g00675 328 NCBIfam myb-like DNA-binding domain, SHAQKYF class 178 232 IPR006447 GO:0003677
Rops6g00675 328 SUPERFAMILY Homeodomain-like 177 233 IPR009057 -
Rops6g00675 328 Gene3D - 177 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00675 Rops-Chr6 17354370 17357814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00675 164 306 G2-like Transcription Factor Family AT4G28610 46.207 3.62e-31 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Rops6g00675 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00675 - - psat:127115590 308.531