Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00674 ATGCAAGGAAATCAATGGGAATCTTACATAGGAAATAACAACTTAACCCAGGTGAGTTTTCAAGTTCAGCAACATGATCAGTATCAGAATGAGATTCCTCTTTGGAGTATGGAGTTTCCAACTACAACAGATTCACCCTTTCTATTTTGCCAAGCTTCTGAAGATAACTACTCTGCCAAACAAGATCAACCTGCCTCATCTCAATTCTCAAACTCATTGCAATCGGTTGCAGAATCTTTCATGTCTAGCAGTGAAGATAGTATTTCTTCTTCTGAAAAGTATAGTGAATTTCCTTCTTGTTCTGGAAAATATGGTAATTTTCTGGTTGACAATATGCCATTTTGTGACTACGTCCCACGAGAACATGAGAAGGTGCTCGAGGATGATGCTGCCCCAGATAAGAGGTCCCTTGAGATTTCCTTTCAGAGAACTCAGTGGGCCTCATGTGCAAAGCCAGATAAGCAGTCTTCACCTTGTGGCGTTGCTTTTGCAACATGTTGCAACTCTGATTCTAGGAGAACTGCAACTGGTAAAAGAAGAATAAGATGGACAAAAGATCTGAATGAGCCATTTATTATGATTGTTAACCACCTTGGTGGTCCAGAAAGGGCAAAGCCTAAGGCTATATTAGAGATGATGGGTTCAGATGTGCTGACCATTTCTCACGTTAAAAGTCATTTGCAGAAATATCGATCTACATTACACATGCACGAAGCTTTGAAGGAAAGATCTGTTGAAGGACATAGAACAGATGGGATCACTGAGCTTCAAGTCAAAATCCAAATGCATATTGAAGAATCACGGCAACTGCAACTTGAGGTTCAGAGGAACAATCACCTACAACTTGAGATGCTGAGAAATTTGCAAGTGCTAATTGATCAGCAGAGGAAGCAGCTCAAATTAAGGTTAGATCACCAAAAACAGAGAACCAAGATGGAGAAAATACCTGATTCAGAACTCGATGTGATTATGCCAGAATGGGATTGA 987 0.4022 MQGNQWESYIGNNNLTQVSFQVQQHDQYQNEIPLWSMEFPTTTDSPFLFCQASEDNYSAKQDQPASSQFSNSLQSVAESFMSSSEDSISSSEKYSEFPSCSGKYGNFLVDNMPFCDYVPREHEKVLEDDAAPDKRSLEISFQRTQWASCAKPDKQSSPCGVAFATCCNSDSRRTATGKRRIRWTKDLNEPFIMIVNHLGGPERAKPKAILEMMGSDVLTISHVKSHLQKYRSTLHMHEALKERSVEGHRTDGITELQVKIQMHIEESRQLQLEVQRNNHLQLEMLRNLQVLIDQQRKQLKLRLDHQKQRTKMEKIPDSELDVIMPEWD* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00674 328 Coils Coil 253 273 - -
Rops6g00674 328 Gene3D - 177 234 - -
Rops6g00674 328 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 173 311 IPR044848 GO:0003700
Rops6g00674 328 NCBIfam myb-like DNA-binding domain, SHAQKYF class 178 232 IPR006447 GO:0003677
Rops6g00674 328 SUPERFAMILY Homeodomain-like 177 233 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00674 Rops-Chr6 17320797 17324369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00674 164 306 G2-like Transcription Factor Family AT4G28610 45.517 1.36e-29 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Rops6g00674 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00674 - - psat:127115590 307.76