Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00671 ATGGCTGAATCAGCAGCAAACATGCAGAGAAAAAATGGAGAAGAAGAAGAAGATGACTACATGGGTGATCTTTCTCAGTTCCTTCCTTCCGATGCTTTGGACCCTCCAAAGTCTTCTTCATCCACAAAGATTTCTAACAAGAAAGATCCTTCAGTCAACTCATCCAAGACTCAGTTGAAAAATCTTAGCTGGCAAGAACGGCGAAAACTTGAAAGAGAAAGAAAGCAACAAGAAGAGGATGAGCAAACCTTAGCAAAAGTGGAAGCTCCATTACCACAATCCAACATTGGGTTTAAGCTGCTCAAACAGATGGGTTATACCCCAGGTTCTGCCCTTGGCAAGCAGGGCATGGGCAGGGCTGAACCAGTGGGGATTGAAATTCGACGGTCACGAGCAGGTATAGGCTTAAATGATCCCCACAAGGAGAAGAGGAAAAAAGAGGAAATCATGATTGACAGGAAAAAGAGGAAAGAAGAGACCCTAATGGAAGAATTTGGGTCTAGGCAGAAGTCAAGGTGGCAGAGTAGGAGAATTGTAGTTAATTTCAATAAGGCAAAGGCTGCCCTTGACCAATTGGAGAATAGGGAAATCGTGGAGCCACAAAAGAATGAGGATGATTCACAGGATGAAGACGAAGAAGAGGAAGAAATAACAGAAGAGGACTTGCATGATGTTTTGATGAAACTGAGGGATGAGTTTAATTATTGCCTCTTCTGTGGATGCAAATATGAATCAACGTCTGCCCTTTTGGACAACTGCCCTGGAACCAATGAAGATGACCACTAA 786 0.4326 MAESAANMQRKNGEEEEDDYMGDLSQFLPSDALDPPKSSSSTKISNKKDPSVNSSKTQLKNLSWQERRKLERERKQQEEDEQTLAKVEAPLPQSNIGFKLLKQMGYTPGSALGKQGMGRAEPVGIEIRRSRAGIGLNDPHKEKRKKEEIMIDRKKRKEETLMEEFGSRQKSRWQSRRIVVNFNKAKAALDQLENREIVEPQKNEDDSQDEDEEEEEITEEDLHDVLMKLRDEFNYCLFCGCKYESTSALLDNCPGTNEDDH* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00671 261 Coils Coil 67 87 - -
Rops6g00671 261 Pfam G-patch domain 93 136 IPR000467 GO:0003676
Rops6g00671 261 MobiDBLite consensus disorder prediction 62 85 - -
Rops6g00671 261 MobiDBLite consensus disorder prediction 32 61 - -
Rops6g00671 261 PANTHER UNCHARACTERIZED 14 261 IPR039249 -
Rops6g00671 261 SMART DUF4187_2 207 261 IPR025239 -
Rops6g00671 261 SMART G-patch_5 91 137 IPR000467 GO:0003676
Rops6g00671 261 MobiDBLite consensus disorder prediction 1 92 - -
Rops6g00671 261 ProSiteProfiles G-patch domain profile. 93 139 IPR000467 GO:0003676
Rops6g00671 261 MobiDBLite consensus disorder prediction 203 219 - -
Rops6g00671 261 MobiDBLite consensus disorder prediction 193 219 - -
Rops6g00671 261 Pfam Domain of unknown function (DUF4187) 209 261 IPR025239 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00671 85 135 C2H2 Transcription Factor Family AT5G26610 43.137 1.18e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00671 - - gmx:100806249 411.764