Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00663 ATGGGGTTTTCTTTGGCTATTGAAGAAGCAGAACAACAAGAACAAGAGACAAAGTTTTTAGGTTCTTCTATGATCATGGCTTCTTCCAGTGTTAAGAGCACCAACTCAACAACAACAACAACAACAGCTCAACTTGAACCACTTCCACCATCTCATCATCACCATCTTCATCATCATCATCAACCTCAATATCCTCATCAAATACAAGACCATCAAATTTCTTTTGGAATGATGCCATCTTCCTCATCATCCTCTATCCCAGGAAATTACCTAAGCAAAGATTCTGGTGCTTATGATTTGGGTGAATTGGATCAAGCCTTTTTTTTGTATCTTGATGGACAAACTGACCCCTCCAGTGTTCAAGACCAAAGACCAGAGAACTCATCATCATCAGGAATGAGGCCACCACCAACTCTTAACATTTTCCCATCTCAGCCTATGCATGTGGCACCACCATCCAATTCCAAGGCTAGCATGGAATTACCTTCTCCACAAACCAGTGGTTCCAAGAGACCATCAGAACCGTCCATGGAGTTGGCCAACCCTCGAAATGAACCCGCCTCTGCACCTGAACCACCCAAACCTGTAAAGAGAGAGAGTAATCGCAAGGGTACAACATCAAGTTCTGAACAAGAAGGACCAAAAACACCAGATCCTAAGACACTCAGAAGACTTGCTCAGAATAGAGAGGCAGCAAGGAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAGCAGCTAGAGACAAGTAGGATTAAGCTTAATCAGCTGGAACAAGAGTTACAACGTGCTAGAACTCAAGGCATAATAATGGGTGGAGGTGCACTTTTGGGAGGGGAGCAAGGCATTCCTGTCTCTATGAGTAGCATCAGCTCAGAGGCTGCAATGTTTGATGTGGAATATGGGAGGTGGTTAGAGGAGCACCACAGGCTAGTGTGCGAGCTAAGAGCTGCGGTCCAAGAACACCTTCACGAAAATGAGCTTAGGCTATATGTGGATAATTGCTTGGCTCACTTTGATCAAGTAATGAACCTCAAGAGCATAGTGGCCAAAACAGACGCATTCCATCTTGTTTTTGGCATGTGGAAGACCCCAGCTGAACGTTGCTTCATGTGGATCGGTGGGTTCAGGCCATCAGAACTCATTAAGATTATTCTAAGTCAAATTGAGCCTCTAACGGAGCAACAAATACTTGGTATATGTGGGTTACAACAATCTACACAAGAGGCAGAAGAGGCTCTTTCTCAAGGGCTTGAAGCTCTCAACCAATCTCTCTCAGACATTATAACATCAGACTCTTTGAGTTATCCTCCCAATATGGCTAACTACATGGGACAGATGGCTGTGGCCATGAACAAGCTCTCCACTCTTGAAGGTTTTGTGAGACAGGCAGATAATCTGAGGCACCAAACCATTCATCGTCTTCATCAGTTGCTAACAACACGTCAAGCTGCGAGGTGTTTGGTAGCCATATCTGAGTACTTTCATCGTTTGAGAGCACTGAGTTCTCTGTGGTTGACACGCCCTCGCCAAGAATAG 1536 0.446 MGFSLAIEEAEQQEQETKFLGSSMIMASSSVKSTNSTTTTTTAQLEPLPPSHHHHLHHHHQPQYPHQIQDHQISFGMMPSSSSSSIPGNYLSKDSGAYDLGELDQAFFLYLDGQTDPSSVQDQRPENSSSSGMRPPPTLNIFPSQPMHVAPPSNSKASMELPSPQTSGSKRPSEPSMELANPRNEPASAPEPPKPVKRESNRKGTTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRARTQGIIMGGGALLGGEQGIPVSMSSISSEAAMFDVEYGRWLEEHHRLVCELRAAVQEHLHENELRLYVDNCLAHFDQVMNLKSIVAKTDAFHLVFGMWKTPAERCFMWIGGFRPSELIKIILSQIEPLTEQQILGICGLQQSTQEAEEALSQGLEALNQSLSDIITSDSLSYPPNMANYMGQMAVAMNKLSTLEGFVRQADNLRHQTIHRLHQLLTTRQAARCLVAISEYFHRLRALSSLWLTRPRQE* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00663 511 ProSiteProfiles DOG1 domain profile. 293 507 IPR025422 GO:0006351|GO:0043565
Rops6g00663 511 MobiDBLite consensus disorder prediction 147 174 - -
Rops6g00663 511 CDD bZIP_HBP1b-like 220 272 - -
Rops6g00663 511 SMART brlzneu 216 269 IPR004827 GO:0003700|GO:0006355
Rops6g00663 511 MobiDBLite consensus disorder prediction 115 223 - -
Rops6g00663 511 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 218 262 IPR004827 GO:0003700|GO:0006355
Rops6g00663 511 MobiDBLite consensus disorder prediction 30 47 - -
Rops6g00663 511 FunFam BZIP family transcription factor 219 268 - -
Rops6g00663 511 PANTHER TRANSCRIPTION FACTOR TGA9 139 510 - -
Rops6g00663 511 Gene3D - 219 268 - -
Rops6g00663 511 SUPERFAMILY Leucine zipper domain 220 262 IPR046347 GO:0003700|GO:0006355
Rops6g00663 511 Coils Coil 239 266 - -
Rops6g00663 511 MobiDBLite consensus disorder prediction 115 138 - -
Rops6g00663 511 Pfam Seed dormancy control 311 385 IPR025422 GO:0006351|GO:0043565
Rops6g00663 511 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 223 238 IPR004827 GO:0003700|GO:0006355
Rops6g00663 511 Pfam bZIP transcription factor 220 258 IPR004827 GO:0003700|GO:0006355
Rops6g00663 511 MobiDBLite consensus disorder prediction 30 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00663 Rops-Chr6 17077182 17084537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00663 88 511 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 63.820 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops6g00663 DOG1 4.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00663 K14431 - gmx:100815176 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02874 8 64649589 64656868 Rops6g00663 6 17077182 17084537 PCT