Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00658 ATGACTGAATTTCAAGACTATATCCAACTTTTTCTAGCGTTGTTACTCTCCACCATTGTGGTTCGAGCCATACTCACCAGAAAACGAAACAAGGGTAATCGTCCACCAGGCCCTCCTGCACTTCCTATCATTGGACACCTTCATCTTATTTCTAAGATACCTCACCAAAGTTTTCACAAGCTCTCAACTCGCTATGGACCCATAATGCAAATTTTCCTTGGCTCTGTGCCTGGTGTCGTAGTTTCCACCCCAGAAATCGCCAAGGAGTTTCTTAAAACCCACGAGACTTGCTTTTCAAACCGCTTTAGAAGTGCTGCAGTTCACTACTTATCATATGGGTCCAAGGGCTTCTTGTTTGCGCCTTATGGAGAATACTGGAAGTTCATGAAGAAGCTGTGCATGTCTGAGCTTCTTGGTGGAAGAACCCTCGATCAGCTCCTACCCTTAAGGCAACAAGAGACTCTGAGGTTTCTCAAACTTCTAAAAAAGAAAGGGGAAGAAGGTGAGGCCGTTGATGTTGGTGGTGAGCTCTTGACTCTCACTAATAGTATTATATCAAGAATGACTATGAGCAGAACGTGTTCTGAAAATGATAGTGATGCGGAAAACATTAGGAAGATGGTAACTGACACTGCCGAGCTTGCAGGGAAGTTTAATGTTTCGGACTTTATTTGGTTTTGTAAGAATTTGGATTTACAGGGAATGAACAAAAGGCTTAAAGGTATTCTAGACAGGTTTGACACCATGATGGAGAGGGTGATTAAGGAGCATGAAGAGGAGAGGAAGATAATGAAGGAAAAAGGTGAAGGTGCTCAAATTAGGGACCTGCTTGATATTTTGTTGAAAATACATGAAGATGAGAGCACTGAGATAAAATTGACTAGAGAGAATATCAAGGCTTTCATCTTGGACATATTTATGGCAGGAACCGACACATCTGCTATAACCACTGAATGGGCTCTAGCTGAATTAATCAACCACCCTCATGTGATGGAGAAAGCAAGACAAGAAATCGATTCAGTAACAGCAAAGAGTAGATTAATAGAAGAGTCAGATCTTCCCCATGTTCCTTACTTGGGAGCCGTAGTTAAAGAAACACTAAGGATTCACCCCACAGCTCCAATATTAGGGAGAGAATCATCTGAAAGTTGTAATGTTTGTGGCTATGAGATTCCAGCAAAGTCAGTGTTATTTGTCAATTTGTGGTCTATGGGCAGGGACCCCAACCTGTGGGAGAACCCACTTGAGTTCAGGCCAGAGAGGTTTATGAGTGAAGAGAAACAGTTAGATGTGAGGGGTCAGAATTTCCAAATAATGCCATTTGGGACTGGAAGAAGAGTTTGTCCTGGAGCCTCACTAGCCCTTCAGGTTGTGCCCACTAATCTTGCTGCCATGATTCAGTGTTTTGAATGGAAGGTTGATGGAGAGGGTAATGGGACAGTTAACATGGATGAGAAACCAGGCATAACCATTCCAAGGGCACAACCTTTGATTTGTGTCCCTGTGCCTCGCTTTAATCACTTTCCTTATGACATATAA 1539 0.4269 MTEFQDYIQLFLALLLSTIVVRAILTRKRNKGNRPPGPPALPIIGHLHLISKIPHQSFHKLSTRYGPIMQIFLGSVPGVVVSTPEIAKEFLKTHETCFSNRFRSAAVHYLSYGSKGFLFAPYGEYWKFMKKLCMSELLGGRTLDQLLPLRQQETLRFLKLLKKKGEEGEAVDVGGELLTLTNSIISRMTMSRTCSENDSDAENIRKMVTDTAELAGKFNVSDFIWFCKNLDLQGMNKRLKGILDRFDTMMERVIKEHEEERKIMKEKGEGAQIRDLLDILLKIHEDESTEIKLTRENIKAFILDIFMAGTDTSAITTEWALAELINHPHVMEKARQEIDSVTAKSRLIEESDLPHVPYLGAVVKETLRIHPTAPILGRESSESCNVCGYEIPAKSVLFVNLWSMGRDPNLWENPLEFRPERFMSEEKQLDVRGQNFQIMPFGTGRRVCPGASLALQVVPTNLAAMIQCFEWKVDGEGNGTVNMDEKPGITIPRAQPLICVPVPRFNHFPYDI* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00658 512 Coils Coil 254 274 - -
Rops6g00658 512 CDD CYP93 66 501 - -
Rops6g00658 512 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00658 512 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00658 512 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00658 512 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00658 512 FunFam Cytochrome P450 family protein 26 499 - -
Rops6g00658 512 SUPERFAMILY Cytochrome P450 35 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00658 512 Coils Coil 331 351 - -
Rops6g00658 512 Pfam Cytochrome P450 35 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00658 512 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00658 512 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00658 512 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00658 512 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00658 512 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00658 512 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00658 512 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00658 512 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00658 512 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00658 512 Gene3D Cytochrome P450 19 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00658 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 498 - -
Rops6g00658 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00658 Rops-Chr6 16981881 16984195 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00658 1 504 Cytochrome P450 AT5G06900 50.198 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00658 K24188 - gmx:100805931 788.875