Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00656 ATGAGTGAAGAGAAACATTTAGATGTGAGGGGTCAGAATTTCCAACTAATGCCATTTGGGACTGGAAGAAGAGTTTGTCCTGGAGCCTCACTAGCCCTTCAGGTTGTGCCCACTAATCTTGCTGCCATGATTCAGTGTTTTGAATGGAAGGTCGTTGGAGAGGGTAATGGGACAGTTAACATGGAAGAGAAACCAGGCATGACCCTTCCAAGGGCACAACCTTTGATTTGTGTCCTGTGCCTCGCTTTAATCACTTTCCTTCTAGCATTTAAGTGA 276 0.4529 MSEEKHLDVRGQNFQLMPFGTGRRVCPGASLALQVVPTNLAAMIQCFEWKVVGEGNGTVNMEEKPGMTLPRAQPLICVLCLALITFLLAFK* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00656 91 Pfam Cytochrome P450 10 77 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00656 91 PANTHER CYTOCHROME P450 82C3-RELATED 3 78 - -
Rops6g00656 91 SUPERFAMILY Cytochrome P450 10 79 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00656 91 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 19 28 IPR017972 GO:0005506|GO:0016705
Rops6g00656 91 Gene3D Cytochrome P450 3 76 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00656 Rops-Chr6 16949882 16950157 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00656 3 75 Cytochrome P450 AT4G31970 56.164 7.16e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00656 K24188 - lja:Lj0g3v0045809.1 132.109