Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00654 ATGGATACTCATCTTTCTGTTTCATTCTCTCACAAGTCACAAGACAAAGGTATGTCTGACATTGAAGACTATATCCAACTTTTCCTGGTGTGGTTACTTTCCACCATAGTGGTTCGAGCCATACTCACCAGAAAACGAAACAAGGTTAATCACCCACCAAGTCCTCCAGCACTTCCTATCATTGGACACCTTCATCTTATTTATAAGATACCTCACCAAAGTATTCACAAGCTCTCAACTCGCTATGGACCCATAATGCAATTTTTCCTAGGCTCTGTGCCTTGTGTCGTAGCTTCCACTCCAGAAGTTGCCAAAGAGTTCCTCAAAACCAACGAAACTTACTTCTCCAACCGCTTTAGAAGTGCTGCAGTTCACTACTTATCATACGGCTCAAAGGGCTTCTTGTTTGCACCTTATGGAGAATACTGGAAGTTCATGAAGAAGCTATGCATCTCTGAGCTTCTTGGTGGAAGAACCCTCGATCAGCTCCGTCCCTTGAGGCAACAAGAGACTCTGAGGTTTCTGAGACTTCTCCAGAAGAAAGGGGAAGCATGTGAGGCGGTTGATGTTGGTGGTGAGCTCTTGACTCTCACCAATAATATTATATCAAGAATGAGTATGAGCAGAACATGTTCTGAAAATGATAGTGATGTGGAAGACATGAGAAAGATGGTGACAGAAATTGCAGAGCTTGCAGGGAAGTTTAATGTTTCAGATTATATTTGGTTTTGTAAGCATTTAGATTTGCAGGGATTGAACAAAAAGCTTAAAGAGATTTTGGACATGTTTGACACCATGATGGAGAGAGTGATAAAGGAGCATGAAGAGGAAAGGAAGGCAAGGAAGGAAAGAGGTGAAGGTGCTCAAATCAGGGATCTGCTTGATATTTTGTTGAAAATACATGAAGATGAGAGCACTGAGATAAAATTGACAAGAGAGAATATCAAGGCTTTCATCTTGAATATGGTATTCATGCAGGACATAGTTGTGGTAGGAACCGAGACATCTGCTATAACCATTGAATGGGCTCTAGCTGAGTTAATCAACCACCCTCATGTGATGGAGAAAGCAAGACAAGAAATCGATTCAGTAACATCAAAAAGTAGATTAATAGAAGAGTCAGATCTTCCCAAGCTTCCTTACTTGCGAGCTATAGTTAAAGAAACACTAAGGCTTCACCCTGCAGCACCAATTATTTTCAGAGAATCATCTGAAAGTTGTAATGTTTGTGGCTATGAGATTCCAGCAAAGTCAGTGTTATTTGTCAATTTGTGGTCTATGGGCAGGGACCCCAACCTGTGGGAGGACCCACTTGAGTTCAGGCCAGAGAGGTTCATGAGTGAAGAGAAACAGTTCGATGTGAGGGGTCAGAATTTCCAACTAATGCCATTTGGGACTGGTAGAAGGGTGTGTCCTGGTGCCTCACTAGCACTTTTGGGTGTACCTACTAGTCTTGCTAGTATGATTCAGTGTTTTGAATGGAAGGTTGATGGAAAGGGTAATGGGAAAGTTAACATGGAAGAGAAACCAGCCTTGTCTCTTCCAAGGGCACACCCTTTGATTTGTGTCCCTGTGCCTCGCTTTAATCACTTTCCTTCGAGCATATAA 1608 0.4223 MDTHLSVSFSHKSQDKGMSDIEDYIQLFLVWLLSTIVVRAILTRKRNKVNHPPSPPALPIIGHLHLIYKIPHQSIHKLSTRYGPIMQFFLGSVPCVVASTPEVAKEFLKTNETYFSNRFRSAAVHYLSYGSKGFLFAPYGEYWKFMKKLCISELLGGRTLDQLRPLRQQETLRFLRLLQKKGEACEAVDVGGELLTLTNNIISRMSMSRTCSENDSDVEDMRKMVTEIAELAGKFNVSDYIWFCKHLDLQGLNKKLKEILDMFDTMMERVIKEHEEERKARKERGEGAQIRDLLDILLKIHEDESTEIKLTRENIKAFILNMVFMQDIVVVGTETSAITIEWALAELINHPHVMEKARQEIDSVTSKSRLIEESDLPKLPYLRAIVKETLRLHPAAPIIFRESSESCNVCGYEIPAKSVLFVNLWSMGRDPNLWEDPLEFRPERFMSEEKQFDVRGQNFQLMPFGTGRRVCPGASLALLGVPTSLASMIQCFEWKVDGKGNGKVNMEEKPALSLPRAHPLICVPVPRFNHFPSSI* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00654 535 Pfam Cytochrome P450 52 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00654 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Rops6g00654 535 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 28 521 - -
Rops6g00654 535 Gene3D Cytochrome P450 36 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00654 535 CDD CYP93 83 524 - -
Rops6g00654 535 FunFam Cytochrome P450 family protein 43 522 - -
Rops6g00654 535 Coils Coil 354 374 - -
Rops6g00654 535 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00654 535 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00654 535 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00654 535 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00654 535 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00654 535 PRINTS E-class P450 group I signature 383 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00654 535 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00654 535 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00654 535 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00654 535 SUPERFAMILY Cytochrome P450 52 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00654 535 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00654 535 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00654 535 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00654 535 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00654 Rops-Chr6 16930779 16938163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00654 18 527 Cytochrome P450 AT5G06900 50.781 6.30e-179 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00654 K24188 - gmx:100805931 758.444