Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00653 ATGTCTGAGCTTCTTGGTGGAAGAACACTCGATCAGCTCCTTCCCTTGAGGCAACAAGAGACTCTGAGGTTTCTCAAACTTCTAAAAACGAAAGGGGAAGAAGGTGAGGCCGTTGATGTTGGTGGCGAGCTATTGACTCTTATGAATAATATAATAACTAGAATGGCTATGAGGAGAACGTGTTCTGAAAATGATAGTGATGTAGAAGACATCAGAAAGATGGTTATAGACACTGCAGAGCTCGCAGGGAAGTTTACTGTGTCGGATTTTATTCGGTTTTTGAAGAATTTTGATTTGCAGGGACGGAACAAAAGGCTTAAAGAGATTCTAGACAGGTTTGACACCATGATGGAGAGGGTGATACAGGAGCATGAAGAGGAAAGGAAGAAAAAGAAGGAAAAAGGAACTGACACATCTGCTATAACCATCGAATGGGCTCTAGCTGAGTTAATCAACCACCCACATGTAATGGATAAAGCAAGACAAGAGATCGATTCAGTAACATCAAAGAGTAGATTAATAGAAGAGTCAGATCTTCCCAACCTTCCTTGCATGCGAGCTATAGTTAAAGAATCACTAAGGCTTCACCCTACAACGCCACTTATAGGGAGAAAATCATCTGAAAGTTGTAATGTTTGTGGCTATGAGATTCCAGCAAAGTCCTCACTATTTGTTAACTTGTGGTCTATGGGCAGGGACCCCAACCTATGGGAGAACCCATTTGAGTTCAGGCCAGAGAGGTTTATGAGTGAAGAGAACCAATTAGATGTGAGGGGACAGAATTTCCAACTAATGCCATTTGGGACTGGAAGAAGAGTTTGCCCTGGTGCTTCACTTGCACTTCATGTTGTACCCACTAATCTTGCTGCCATGATTCAGTGTTTTGAATGGAAGGTCGATGGAGAGGGTAATGGGACAGTTAACATGGAAGAGAAACCAGCCATTTCCCTTCCTAGGGCTCATCCTTTGATTTGTGTCCCTGTGCCTCGCTTTAATTGCTTTTCCTTCTAG 1011 0.4283 MSELLGGRTLDQLLPLRQQETLRFLKLLKTKGEEGEAVDVGGELLTLMNNIITRMAMRRTCSENDSDVEDIRKMVIDTAELAGKFTVSDFIRFLKNFDLQGRNKRLKEILDRFDTMMERVIQEHEEERKKKKEKGTDTSAITIEWALAELINHPHVMDKARQEIDSVTSKSRLIEESDLPNLPCMRAIVKESLRLHPTTPLIGRKSSESCNVCGYEIPAKSSLFVNLWSMGRDPNLWENPFEFRPERFMSEENQLDVRGQNFQLMPFGTGRRVCPGASLALHVVPTNLAAMIQCFEWKVDGEGNGTVNMEEKPAISLPRAHPLICVPVPRFNCFSF* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00653 336 PRINTS P450 superfamily signature 265 274 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00653 336 PRINTS P450 superfamily signature 274 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00653 336 PRINTS P450 superfamily signature 187 198 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00653 336 PRINTS P450 superfamily signature 134 151 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00653 336 PANTHER CYTOCHROME P450 98A9 1 131 - -
Rops6g00653 336 FunFam Predicted protein 133 325 - -
Rops6g00653 336 Gene3D Cytochrome P450 2 134 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00653 336 PRINTS E-class P450 group I signature 264 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00653 336 PRINTS E-class P450 group I signature 226 250 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00653 336 PRINTS E-class P450 group I signature 47 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00653 336 PRINTS E-class P450 group I signature 274 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00653 336 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00653 336 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 267 276 IPR017972 GO:0005506|GO:0016705
Rops6g00653 336 Gene3D Cytochrome P450 135 320 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00653 336 SUPERFAMILY Cytochrome P450 2 330 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00653 336 Pfam Cytochrome P450 135 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00653 336 Pfam Cytochrome P450 8 131 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00653 Rops-Chr6 16922824 16925343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00653 1 336 Cytochrome P450 AT5G06900 43.968 2.85e-101 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00653 K24188 - gmx:100805931 468.774