Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00651 ATGCAATCTAGGCTATCCCAACAACCTGATACTGTAGGCAGCAGAACAGAGATTCTTTACATTAAAAGTTGCATTAGAAACTCCACTGAGAAAAGCCAGTTTTGGAGATTATTCCTTCCAGCAATATGGAAGTAAGCACGGTCAAAGTTTCGCCTTCCACCAGGTCCATTGGCCTTACCAGTTATTGGACACTTCCACTTACTACAGCCACCCCTTCACAAAGCAGTTCACATGATCTCAAATCGTTATGGACCCTTGATTCTAATCTATCTTGGGTCCACTCCAATGGTGTTTGTTTCCTCTTCAGAAATAGCCAAAGAGATCTTCAAAACCCATGAAGTTTCTTTCTCCAATCGACCTGCAAATGTTGCTATCAGATATCTCACTTACGACGCATCTGATTTAGGATTCGCTCCTTATGGAACCTATTGGAAGTTCATGAAGAAACTTTGCATGTCAGAACTTCTTAATGGAAGGATGCTGGATCAACTCCTTCCCATAAGGCAAGAAGAGATAAACAGGTTTTTGAAAATGATACACAAGAAAGCTGAAGCATATGAGGCTATCAATGTTGCAGATGAGCTTTTGAAGCTAACAAACAGCATAGTAATGAGAATGGCAATAAGCAAAAGCTGTTTCAACACTGATGATGAAGCTCACAAGGTGACAGAAAGGGTGAAAGAATCTGCCATGCTTAGTGGAATGTTTAACCTTGCAGATTATTTTTGGTTCTGTAAAAGATTAGATCTTCAGGGAATGGGGAAGAAGCTAAAGAAGGTTCGCGACAGGTTTGATTCCATGATGGAAAGTATCATTCAGGAACATAAAGAGGCAAGAAGTGAATTGATCAGAAAGGATACTGCAAAGGATGTGCTTGATGCTCTTTTGAGTATTTCAGAAGATCAAAACGCAGAGGTCAAAATAACCAGAGACAACATTAAAGCCTTCTTGGTGGATATGTTCACAGCTGGGACAGATACAACTGCTGTTACTCTAGAATGGTCACTGGCAGAACTAATTAACCACCCAACTATCATGGAGAAAGCAAGGAAGGAGATTGACTCTGTGATTGGAAAGGACAGAATTGTAACAGAATCAGATATAGCTGATCTTCCTTATCTTCAAGCCATAGTAAAGGAGACCCTGAGGCTTCACCCTCCATCTCCATTTATATTGAGAGAGTCAACTGAGAACTGCACCATTACTGGATATGATATTCCAGCTAAAACTCAGGTTTTCATTAATGTGTGGGCTATTGGAAGAGATCCAAAGCACTGGGATAACCCTCTTGAGTTCAGCCCAGAAAGGTTTCTCATCAATGATGATAATGGAAAGAAGAGCCAACTTGAAGTTAGGGGACAACATTATCAGCTTTTACCTTTTGGGAGTGGAAGAAGACGGTGTCCTGGAACTTCACTAGCTCTAAATGTTGCTCAAACTACCCTTGCTTCTATGATTCAATGCTTTGAATGGAAGAATGAAGATGGAGGGAACGGTAATGTTGACATGAAAGAGGGTCCTTCATTTATTCTTTCAAGAGCTCAACCCCTAATCTGTCTCCCGAAACCCAGACTCATGCCATTTCCTTCCTTGGTATGCTGA 1602 0.4095 MQSRLSQQPDTVGSRTEILYIKSCIRNSTEKSQFWRLFLPAIWK*ARSKFRLPPGPLALPVIGHFHLLQPPLHKAVHMISNRYGPLILIYLGSTPMVFVSSSEIAKEIFKTHEVSFSNRPANVAIRYLTYDASDLGFAPYGTYWKFMKKLCMSELLNGRMLDQLLPIRQEEINRFLKMIHKKAEAYEAINVADELLKLTNSIVMRMAISKSCFNTDDEAHKVTERVKESAMLSGMFNLADYFWFCKRLDLQGMGKKLKKVRDRFDSMMESIIQEHKEARSELIRKDTAKDVLDALLSISEDQNAEVKITRDNIKAFLVDMFTAGTDTTAVTLEWSLAELINHPTIMEKARKEIDSVIGKDRIVTESDIADLPYLQAIVKETLRLHPPSPFILRESTENCTITGYDIPAKTQVFINVWAIGRDPKHWDNPLEFSPERFLINDDNGKKSQLEVRGQHYQLLPFGSGRRRCPGTSLALNVAQTTLASMIQCFEWKNEDGGNGNVDMKEGPSFILSRAQPLICLPKPRLMPFPSLVC* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00651 532 Pfam Cytochrome P450 52 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00651 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Rops6g00651 532 PANTHER CYTOCHROME P450 98A9 45 524 - -
Rops6g00651 532 CDD CYP93 83 520 - -
Rops6g00651 532 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00651 532 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00651 532 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00651 532 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00651 532 Gene3D Cytochrome P450 43 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00651 532 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00651 532 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00651 532 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00651 532 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00651 532 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00651 532 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00651 532 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00651 532 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00651 532 FunFam Cytochrome P450 family protein 43 518 - -
Rops6g00651 532 SUPERFAMILY Cytochrome P450 52 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00651 Rops-Chr6 16900556 16904231 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00651 44 520 Cytochrome P450 AT5G06900 47.390 1.75e-168 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00651 K24188 - gmx:100811919 735.717