Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00650 ATGACAATCAGTTTTCAACAATCAATGGCTTATTTTGGTGACCATTTTGAGCTACTTCTCATTTGGCTAGCCTCAATCTTCTTGTTACACTTGTTCTTCACCAAGTCTCGCATCAAAGCACGCCTTCCACCAAGCCCTCGTGCCTTGCCCATTCTAGGACACCTCTACCTTCTCACCAAGCTCCCTCACCAAGCATTTCACAAGATCTCATCACGTCATGGCCCTTTGGTCTATCTCTTGTTTGGTTCCAAACCTTGTGTGCTTGTTTCCTCACCTGAAATGGCAAAACAATGCCTCAAAATTCATGAAACTAGTTTCTTAAACCGACCCAAGAGAACCAACTTGGACTACATCACATACGGTTCTGCAGATTTTGTCTTGGCACCCTATGGACCTTATTGGAGGTTCATGAAGAAGCTTTGCATGACTCAACTCCTTGGAGGTCGAATACTCAATCAGCACCTTCCTATTAGAGGTGAAGAAACAAAGCTGTTCTTGAAAGGTATGATGAGAAAGGCTGATTTGAGAGAAGTGGTTAATGTAGGGGAGGAGCTAGCCATGCTTACAAATAACATCATCACAAGGATGGCTTTGAGAAGAAGGTGTTGTGATGTCGAAGGGGAAGGGTACCAACTTATTGAGCTGGTAAAAGAGATGACTGAGCTAGGTGGCAAGTTTAACCTTGGAGATATGTTGTGGTTTGTTAAGAAGTTGGATTTGCAAGGATTTGATAAAAGGCTTGAGAGTGTTCGAAGTAGGTATGATGCTATAATGGAGAGGATCATGAAGGAACATGAAGATGCAAGGAGGAAAAAGGAGGAGGAGGATGAAATGGATAGTAATGGAGATGAAGCTGTGAGGGATTTACTTGATATTTTACTTGATATCCATGCTGATGAAAGTTCAGAGATAAGATTAACCAGAGAAAATATTAAGGCCTTCATCATGAACATGTTTGGTGCTGGAACTGATACATCAGCCAATACAATAGAATGGGCATTGGCTGAGCTAATAAACCATCCAGATATGATGGCGAAAGCAAGCCAAGAGATTGATTCAGTAGTTGGTAAGAGCAGATTGGTGGAGGAATCAGATATTCCCAATTTACCCTATGTTCAATCCATAATAAAAGAAACAATGAGACTTCACCCAACTGGGCCTTTAATAGTGAGGCAGTCAACTGAAGATTGTAATATTGATGGGTATTATATTCCAGCAAAAACCACTTTATTTTTAAATGTATGGGCTATTGGTAGGGACCCAAACTACTGGAATAACCCACTTGAGTTCCAGCCAGAGAGGTTCCTTAATGAAGAGGGACAAAGCCCTTTGGATCTAAAGGGGCAGCATTTTGAACTATTGTCTTTTGGAGCTGGAAGAAGAAGCTGCCCTGGTGCTTCACTAGCTTTGCAGATTGTTCCTACAACCCTGGCTGGTATGATTCAGTGTTTTGAATGGAAGGTTGGTGAAGAAGGCATTGGAACTGTTGACATGGAGGAGGGACCTGGAATGGCCCTTCATAGGGCACATCCCCTGCTATGCATCCCTATGGCTAGGGTCCACCCTTTTACTCTGGTCTGA 1581 0.4263 MTISFQQSMAYFGDHFELLLIWLASIFLLHLFFTKSRIKARLPPSPRALPILGHLYLLTKLPHQAFHKISSRHGPLVYLLFGSKPCVLVSSPEMAKQCLKIHETSFLNRPKRTNLDYITYGSADFVLAPYGPYWRFMKKLCMTQLLGGRILNQHLPIRGEETKLFLKGMMRKADLREVVNVGEELAMLTNNIITRMALRRRCCDVEGEGYQLIELVKEMTELGGKFNLGDMLWFVKKLDLQGFDKRLESVRSRYDAIMERIMKEHEDARRKKEEEDEMDSNGDEAVRDLLDILLDIHADESSEIRLTRENIKAFIMNMFGAGTDTSANTIEWALAELINHPDMMAKASQEIDSVVGKSRLVEESDIPNLPYVQSIIKETMRLHPTGPLIVRQSTEDCNIDGYYIPAKTTLFLNVWAIGRDPNYWNNPLEFQPERFLNEEGQSPLDLKGQHFELLSFGAGRRSCPGASLALQIVPTTLAGMIQCFEWKVGEEGIGTVDMEEGPGMALHRAHPLLCIPMARVHPFTLV* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00650 526 Coils Coil 258 278 - -
Rops6g00650 526 Gene3D Cytochrome P450 30 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00650 526 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00650 526 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00650 526 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00650 526 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00650 526 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00650 526 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00650 526 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00650 526 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00650 526 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00650 526 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00650 526 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00650 526 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00650 526 Pfam Cytochrome P450 43 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00650 526 CDD CYP93 74 516 - -
Rops6g00650 526 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 21 513 - -
Rops6g00650 526 SUPERFAMILY Cytochrome P450 43 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00650 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Rops6g00650 526 FunFam Cytochrome P450 family protein 34 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00650 Rops-Chr6 16883690 16885706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00650 18 519 Cytochrome P450 AT5G06900 51.984 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00650 K24188 - gmx:100807524 861.677