Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00644 ATGCTCACGACAACACTGACCCACTTCACCTCCAGAAGAAAATGTTCAGATGGTCTTGCTTTTGGAACATGTGCTGTTTGTTCTAGTATTTCCCTCCTCTTTCTGGGTTCTAATAGGTTGAGTTACTTGTTTCTTTGGCTTTGCAGAAAACAGTGTGTACAGACTTTTAATGTCTTTGATTTTCTGAAAGATATTGTCAGCAAGGTTCCTGATTTAGGTGGTTCTGCTGCAACTGGTGACGCCGCCGGTGGTGGTGTTGTTGTTGTTGTCGGCCACGCGCCGTCGAGTGGTGGTGGGACCGGCGGCGACCCTTGGGCTTGTGTAGGAAGAGCTGGTGGTGGGGCCGCCGGATTGCATGAGAACACCGTTTATGCTAAAAGAGTCACTACAAGTGAAACATCTGGGATAAATGGAGCACAACCTTTTTCTTTCCATGTCAAAGCTAAGGAGTTCTTATGGAGTCATTCAGGTTATCAACATGTCTGGCCAGAATTAGAATTTGGCTGGAAAATCATTGTTGGCACCTTGATTGGAATCTTGGGAGCAGCATTTGGAAGTGTAGGGGGAGTTGGTGGTGGAGGCATCTTTGTGCCAATGCTTATCCTGGTTATTGGGTTTGATCCAAAATCAGCAACTGCTATTTCAAAGTGTATGATCACGGGTGCAGCGATCTCTACTGTATTCTTCAACTTGAAGCTAAAACATCCCACACTTGATATACCAGTTATCGACTATGATTTGGTGCTGCTTATTCAACCCATGCTCATGCTTGGTGTTAGCATAGGAGTTCTTTTAAGTGTAATATTTGCAGATTGGATGGTCACTGTTCTTCTAATTATTCTCTGTCTAGGGACATCAATCAAGGCATTCTTCAAGGGTGTTGAGACATGGAAAAAGGAAACCATGATAAAAGAGGAGACTATCAAGCTTTTGGAGTCCATTGCCACTAGCAGTAGTAGGGAAGAGGAATACAAGTGTCTTCCTGGTTGTCCAGATGGTGGTCCGCAAAAGAAAACTAGAAAACTTGAGGGGACCATCCTAGGCAACATTTATTGGAAGCAGTTTGGACTTCTTTCGTTTGTCTGGCTTGCTTACCTTCTCTTACAAATAGCCAAAACCTATACAGCTTCCTGTTCAATCACATACTGGATACTTATGTCTTTACAGATACCAGTTTCTCTAGGGGTGTATTTGTATCAAGCAATAGGCCTATATAAGGGGTGGAGTGTTAATGCTTCCAAAGGAGATCAAGGCATAGATTGGCAATTGCAGCATCTAATTCTATCAAGTGTCTGTGCTCTACTTGCTGGAATTATTGCTGGACTTCTTGGTATAGGTGGGGGATTTGTCATGGGTCCTTTGTTTCTGGAATTGGGAATTGCACCTCAGGTTGCAAGTGCCACAGCCACATTTGGAATGACATTCTCAGCATCTATTTCTGTTGTACAATATTACCTCTTGAATCGTTTTCCAGTTCCTTATGCTCTCTACCTTACCCTTGTGGCTGCCTTAGCAGCATACATAGGACAACTTATCATTGACAAGCTTGTTAATATCTTCCAAAGAGCGTCTTTGATTATCTTTGTCTTGGCCTTCACAATATTTGTTAGTACAGTTGCACTGGGTGGAGTAGGCATATCAGACATGATTGCAAAGATTCAGAGGAATGAATACATGGGATTTGAGGATCTCTGCTTGTACAATGCATAG 1710 0.4298 MLTTTLTHFTSRRKCSDGLAFGTCAVCSSISLLFLGSNRLSYLFLWLCRKQCVQTFNVFDFLKDIVSKVPDLGGSAATGDAAGGGVVVVVGHAPSSGGGTGGDPWACVGRAGGGAAGLHENTVYAKRVTTSETSGINGAQPFSFHVKAKEFLWSHSGYQHVWPELEFGWKIIVGTLIGILGAAFGSVGGVGGGGIFVPMLILVIGFDPKSATAISKCMITGAAISTVFFNLKLKHPTLDIPVIDYDLVLLIQPMLMLGVSIGVLLSVIFADWMVTVLLIILCLGTSIKAFFKGVETWKKETMIKEETIKLLESIATSSSREEEYKCLPGCPDGGPQKKTRKLEGTILGNIYWKQFGLLSFVWLAYLLLQIAKTYTASCSITYWILMSLQIPVSLGVYLYQAIGLYKGWSVNASKGDQGIDWQLQHLILSSVCALLAGIIAGLLGIGGGFVMGPLFLELGIAPQVASATATFGMTFSASISVVQYYLLNRFPVPYALYLTLVAALAAYIGQLIIDKLVNIFQRASLIIFVLAFTIFVSTVALGGVGISDMIAKIQRNEYMGFEDLCLYNA* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00644 569 PANTHER CEREBLON 136 565 - -
Rops6g00644 569 Pfam Sulfite exporter TauE/SafE 176 293 IPR002781 GO:0016020
Rops6g00644 569 Pfam Sulfite exporter TauE/SafE 431 536 IPR002781 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00644 Rops-Chr6 16827400 16832561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00644 33 79 CCAAT-HAP5 Transcription Factor Family AT3G12480 48.936 1.70e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00644 - - aprc:113847477 578.556