Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00637 ATGGAGTTGTGCAGTGGTGGTGAACTCTTTGACCGTATTATTGCCAAAGGGAACTACTCAGAACGTGAAGCAGCTACAATCATGAGGCAGATTGTGAATGTGGTTCACGTGTGCCATTTCATGGGTGTAATGCATAGAGACCTTAAGCCAGAGAATTTCTTGTTGACTACTAAGGATGAGAATGCTGCAGTTAAAACTACTGATTTTGGACTCTCCATTTTCATTGAGGAAGGTCCTCCAGTCCATGCCAGGTTTGTGTCCATTCCATCTTCTTCCACCTGCAATTTCATGGCTCTTTACTTGCTCAAGATGTTGTTAATGGAATAA 327 0.4251 MELCSGGELFDRIIAKGNYSEREAATIMRQIVNVVHVCHFMGVMHRDLKPENFLLTTKDENAAVKTTDFGLSIFIEEGPPVHARFVSIPSSSTCNFMALYLLKMLLME* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00637 108 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Rops6g00637 108 SUPERFAMILY Protein kinase-like (PK-like) 1 78 IPR011009 -
Rops6g00637 108 Gene3D Transferase(Phosphotransferase) domain 1 1 104 - -
Rops6g00637 108 Pfam Protein kinase domain 1 84 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00637 108 ProSiteProfiles Protein kinase domain profile. 1 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00637 108 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00637 Rops-Chr6 16646471 16648325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00637 1 78 EF-hand Containing Proteins AT1G50700 79.487 5.73e-42 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops6g00637 Pkinase 1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00637 K13412 - gmx:100816157 147.132