Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00627 ATGCCTGGATCCTTTTCAACGACGCCAGTTTATATTGGGGGATTTAAGAGTGAAATTGAAGCAGCCAGAGCTCATGATTTGATTGCCATGAAGACATGGAGCAATTCTGCACAGACAAATTTTCCGGTGAGTAGCTATTCGAAGGAAATCACAGCAATGAGAAGCATGACAAGAAGTGAATGTATTCTTGCCATTAGAAAGGCCGCCAAAAAGAGAAGATCAGATGACATTGGCTTCTCTAGAAACACCAATAACAAAAGTTCAGGCACTGAGGAGGATGCAAGTGGTGCATATAATATTGCATCAAAAAGAAGGAAGAGCAAGAAGGCAATTACTTATTTGGAGAGTGCAACACTTCCAAATGAAGAAGAAACCGTTTCCAGTTCACAGAAGGAACAAACAATTGATGACATTAGAGAACCAAGTGGTCAAGAATCACAAGCACCACAAGCCTTGCGGAACCAGCAAAAGAATTTTAATGAGTTTTATGAGAACCCTTTAGGCAATAACTTTCTATACTATAGCCCAGACCTTCCCTTTCTTCCTGACTTTCAAGATGACCTGAGTTTCCAAAATGATCTCAGTTTCCTTCACAAGACATCTGATTTTGGAACTCAAGTTGAGGCTAACTTAGAAACTTCAGGCAGTGCCCTCAATGTGGAGTATTCAGTGGTGAAAGAGAATTTAGGAACTGAAAATGGTGTTTATTCATTGGTAAGTAATGAACCATTCCAGTATAGTTTGAGACAAGTCCTGCCTCACCACTTAAAATCCAACTCCCCTAATGATTTGCAGAATGCTTGCTCAGAAACAAACAATGGTTTCAAATGTGAAATGGTTGAGATTCCGAATGATTTTGACATCAACCAATATCTCAGTAGCTCTTCCATGAAGGATCAGAAAGCTGATTTCTCTGATAATGTGGATGGATTTTCCACACAAAATGGAGACTGA 954 0.3962 MPGSFSTTPVYIGGFKSEIEAARAHDLIAMKTWSNSAQTNFPVSSYSKEITAMRSMTRSECILAIRKAAKKRRSDDIGFSRNTNNKSSGTEEDASGAYNIASKRRKSKKAITYLESATLPNEEETVSSSQKEQTIDDIREPSGQESQAPQALRNQQKNFNEFYENPLGNNFLYYSPDLPFLPDFQDDLSFQNDLSFLHKTSDFGTQVEANLETSGSALNVEYSVVKENLGTENGVYSLVSNEPFQYSLRQVLPHHLKSNSPNDLQNACSETNNGFKCEMVEIPNDFDINQYLSSSSMKDQKADFSDNVDGFSTQNGD* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00627 317 Gene3D AP2/ERF domain 4 44 IPR036955 GO:0003700|GO:0006355
Rops6g00627 317 MobiDBLite consensus disorder prediction 119 152 - -
Rops6g00627 317 MobiDBLite consensus disorder prediction 297 317 - -
Rops6g00627 317 SUPERFAMILY DNA-binding domain 6 44 IPR016177 GO:0003677
Rops6g00627 317 ProSiteProfiles AP2/ERF domain profile. 1 42 IPR001471 GO:0003700|GO:0006355
Rops6g00627 317 MobiDBLite consensus disorder prediction 80 95 - -
Rops6g00627 317 MobiDBLite consensus disorder prediction 73 96 - -
Rops6g00627 317 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 9 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00627 Rops-Chr6 16515245 16520755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00627 10 120 AP2-EREBP Transcription Factor Family AT3G20840 34.000 1.43e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00627 K09285 - gmx:102665149 115.546