Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00604 ATGCTTGAAAAGGAGGATTTTGTCCTTAGATCACCATTCTTGCTTTGTATCTTCATTGGCTTCTTGATACATTCTCTTGTGATAGCAGAGATTCCATCAGGTTCAAAACTTTCTGTGGTTGACAATGATTATTGGGTTTCCTCCAATGGTGATTTTGCATTTGGATTCTTTAACATTTCAGATCTACCTAACCAGTTTAGTGTTGGCATTCGTTTCAATTCCAAGTCTATACCATATAGCCAACAAACTGTGGTCTGGGTTGCTGGTGCTCAAGCCACAGTTGGTAACATGTCCTATTTTGAACTCACTCATGAAGGGGAACTTGTCCTTTTTGATTCCTTACAAGAAGTTTCTGTTTGGACCAGTCAAACAGGAAACCAATCTGTTGTTTCTGCTTCTCTTCTTGACAATGGAAATTTTGTTCTAATGGACAGTGAGAAGAACATCATTTGGCAAAGTTTTGATACTCCATCTGATACACTTATCCCAGGACAGAGTTTACCTGTCAATTATTTACTTAGAGCTGCAACCAAGAATCCCAAGTCTAGTTACTATAGTCTTCACATGAATGCTTCAGGTCATTTAGAGCTACAGTGGGAAAGTAATGTTATCTACTGGACAAGTGAAAGCCCTTCTGCTTCAAATCTCAGTGCTTTTTTTACAACGAGTGGAGCTTTGGAACTTCGAGACCAAAGTTTGAAACCTGTTTGGTCTGTGTTTGGAGATGATCACAATGATTCTGTGAGTTACAGGTATCTTAGGCTTGATTCGGATGGCAATCTCCGGATGTATTCATGGGTTGAAACTTTACAATCATGGAGATCAGTCTGGCAAGCTGTTGAAAATCAATGCAAGGTCTTTGCTACTTGTGGTCAATTTGGTGTCTGTGTCTTCAATGCTTCAGGTTCTGCTGATTGCAGATGCCCATTTGAGGTAACTGGGACTAACAAGTGTTTGGTTCAATCTGAGGAGGAGTGTGAATCTGGCTCCAATATGATAGCATATAAGAACACTTATCTGTATGGAATCTACCCTCCTGATGAATCTGTTATCACAAGTAGTTTGCAGCAATGTGAACAGTTGTGCTTGAATGATTCAAAATGTACAGTAGCAACCTTTTTCAATGATGGAACTCCACAATGCTCAATACAGAAAACTAAGTATGTCACTGGTTATGCAGATCCATCTGTAAGCTCAATATCATTTGTTAAGAGATGCTCAGGTCCATTTGCTGTAAATCCTGGTATCACTAAATCTCCACCATCCGAACCATCTCCTAGGCTTTGTGTTCCTTGTCTAATAGGAGCTGCTGCAGGAACATTCTTCATCATTGTTATTCTCCAGTTGGGAGTTGTGTTCTGCATCTGCAGAAGAAAACACTATACTAGGAAAAAGGACACTTCAGCTTTCACATGCCCAAACTCGAAAGGTTTAATTGTGTTGTCCATCTCAGAAATCAAGAACCTCACAGGAGATTTCAAGAATCAAATTGGGCCAAAGATGTTCAAGGGTGTGCTACCAAACAATCACCTGATTGCAATTAAAGACCTGAACGCCTCCATAGAAGAAAGGAGGTTCCGGAGTGCCATTCTGAAGATGAGTAGCATCCATCACAAGAACCTTCTGAAGCTGGAGGGTTATTGTTGTGAGTTTGATCATAGGTTTTTGGTGTATGAATATGCCAAAAATGGTTCACTGGGCAAGTATATAGATGATTCTGCTCTTTGCAAGAAGCTAACTTGGAGAAAGAGAATCGAAATATGCTCAAGTGTGGCAAAGGCCATCTGTTATTTGCACTCTGGGTGTAGGGAGTTCATAAGCCATGGAAACTTAAAGTGTGAAAATGTTATGTTGAATGAGAACTTAGAAGCTAAGGTGAGTGAATTTGGGTTTGCTAGAGTAGATGGTGAGGCAACATATTGTGGCTTTTCAGCTGAGAAGGATGTAGATGATTTTGGCAAGTTAGTTTTAACTTTGTTAACTGGGTGTCGCAACCAGGATCACGTCGAACTTTGTGAGTGGACATATAAAGAATGGATGGAAGAGAGGGTAGCAAATGTGGTTGATAAAAGAATAGAAGGAGGTTACAATTCAGAGGAATTGGAGCGTGCATTAAGAATTGCATTTTGGTGCCTTCAAATGGATGAAAGAAGGAGACCTTCTATGGGGGAGGTAGTAAGAGTACTTGATGGTACATTGAATGTTGATCCACCACCACCTCCATTTGCCTTCCAAAGACCATTGCCGGTTGATGATTCAGAAGAAAATGGTTCAGAATCAGAAGTGTAG 2289 0.4028 MLEKEDFVLRSPFLLCIFIGFLIHSLVIAEIPSGSKLSVVDNDYWVSSNGDFAFGFFNISDLPNQFSVGIRFNSKSIPYSQQTVVWVAGAQATVGNMSYFELTHEGELVLFDSLQEVSVWTSQTGNQSVVSASLLDNGNFVLMDSEKNIIWQSFDTPSDTLIPGQSLPVNYLLRAATKNPKSSYYSLHMNASGHLELQWESNVIYWTSESPSASNLSAFFTTSGALELRDQSLKPVWSVFGDDHNDSVSYRYLRLDSDGNLRMYSWVETLQSWRSVWQAVENQCKVFATCGQFGVCVFNASGSADCRCPFEVTGTNKCLVQSEEECESGSNMIAYKNTYLYGIYPPDESVITSSLQQCEQLCLNDSKCTVATFFNDGTPQCSIQKTKYVTGYADPSVSSISFVKRCSGPFAVNPGITKSPPSEPSPRLCVPCLIGAAAGTFFIIVILQLGVVFCICRRKHYTRKKDTSAFTCPNSKGLIVLSISEIKNLTGDFKNQIGPKMFKGVLPNNHLIAIKDLNASIEERRFRSAILKMSSIHHKNLLKLEGYCCEFDHRFLVYEYAKNGSLGKYIDDSALCKKLTWRKRIEICSSVAKAICYLHSGCREFISHGNLKCENVMLNENLEAKVSEFGFARVDGEATYCGFSAEKDVDDFGKLVLTLLTGCRNQDHVELCEWTYKEWMEERVANVVDKRIEGGYNSEELERALRIAFWCLQMDERRRPSMGEVVRVLDGTLNVDPPPPPFAFQRPLPVDDSEENGSESEV* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00604 762 ProSiteProfiles Bulb-type lectin domain profile. 158 276 IPR001480 -
Rops6g00604 762 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 640 737 - -
Rops6g00604 762 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 156 - -
Rops6g00604 762 SUPERFAMILY Protein kinase-like (PK-like) 500 729 IPR011009 -
Rops6g00604 762 ProSiteProfiles Protein kinase domain profile. 441 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00604 762 Pfam PAN domain 332 404 IPR003609 -
Rops6g00604 762 SUPERFAMILY alpha-D-mannose-specific plant lectins 170 275 IPR036426 -
Rops6g00604 762 PIRSF SRK 5 640 IPR024171 GO:0004674
Rops6g00604 762 PIRSF SRK 637 762 IPR024171 GO:0004674
Rops6g00604 762 MobiDBLite consensus disorder prediction 737 762 - -
Rops6g00604 762 ProSiteProfiles Bulb-type lectin domain profile. 30 155 IPR001480 -
Rops6g00604 762 Gene3D Phosphorylase Kinase; domain 1 454 560 - -
Rops6g00604 762 Gene3D - 157 273 IPR036426 -
Rops6g00604 762 Gene3D Transferase(Phosphotransferase) domain 1 640 735 - -
Rops6g00604 762 Pfam D-mannose binding lectin 83 171 IPR001480 -
Rops6g00604 762 SMART blect_4 36 157 IPR001480 -
Rops6g00604 762 Pfam S-locus glycoprotein domain 246 308 IPR000858 GO:0048544
Rops6g00604 762 ProSiteProfiles EGF-like domain profile. 280 319 IPR000742 -
Rops6g00604 762 SMART ntp_6 327 405 IPR003609 -
Rops6g00604 762 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 157 275 - -
Rops6g00604 762 ProSiteProfiles PAN/Apple domain profile. 326 406 IPR003609 -
Rops6g00604 762 Pfam Protein tyrosine and serine/threonine kinase 509 635 IPR001245 GO:0004672|GO:0006468
Rops6g00604 762 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 457 560 - -
Rops6g00604 762 CDD B_lectin 46 157 IPR001480 -
Rops6g00604 762 Gene3D - 28 156 IPR036426 -
Rops6g00604 762 PANTHER OS07G0415500 PROTEIN 13 743 - -
Rops6g00604 762 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 561 639 - -
Rops6g00604 762 Gene3D Transferase(Phosphotransferase) domain 1 561 639 - -
Rops6g00604 762 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 174 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00604 Rops-Chr6 15703817 15707492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00604 445 745 Receptor kinase-like Gene Family AT3G45860 29.565 2.30e-39 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops6g00604 PK_Tyr_Ser-Thr 2.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00604 - - gmx:100815678 1302.35