Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00586 ATGGCCCAAACCAGAAGCAACATAACCATTGGACCTCTTGTTGCAGAAAGTAGCAACTCCTCATGGGTGGTTTCACCTCTTGGTGACTTTGCCTTTGGGTTCCTCCAACTCAATGACACTGAAAATGAACTTTTCTTGCTTTCCATTTGGTATGCCAAGATTCCAGAGAAGACCATAGTTTGGTATGCCAATGGAGACAGTCCTGCACCAAAAGGGTCAAAAGTGGAGCTTAGTGCTAGTGATGGAGTAGTGCTAACTGCTCCAAATGGTGACCAGTTATGGAAAACAGTGAACCTCACTGGTAAAGTTGCAAGTGGTTTCTTGAATGACACTGGCAACTTTGTGCTCAAGGGTGGTGGAGGAAATGGAAACTTTGACATTGTGTGGGAGAGTTTCAAGGATCCTAGGGACACCTTGTTGCCAACACAAATTCTAGAAATGGGTGGGAAGCTTTGTTCAAGATTTCTGGAGTCAAATTTCTCAGAGGGAAGGTTTGAGCTTCTTCTTCAATCAGATGGTATTCTTTCCCTTCATGCTATAAATAAACCCTCTGAGTATGTTAATGAAAACTACTACGAAAGTTATACTGGTGAATCTGACATGTCAAGTCCAGGAATTAAACTTGTGTTTGAGAGATCAGGATACATGTATGTTTTGAGAAAGAACAATGAGAAATACAACTTATCATCATCAAATGAGGTCTCTACAAAGGAATCTTATCTTAGAGCAACACTAACTTTTGATGGGGTCTTTACATTCTATCAACATCCAAAGAGTTCCATTGGTGGCAGTGATGGTTGGAGCCCTTTGTGGTCTCTACCAGATAATATCTGTCTTACCAGACTTTCCTCTGAAGGTAGTGGCATTTGTGGGTTTAATAGCATATGCTCATTGAGAGATGATAAAAGGCCAAATTGTTTGTGCCCAAAAGGGTATTCTCTAGTTGATCCTAATGATCCTTTTGGCAGCTGCAAGCCAGATTTTGTACAAGGATGTGCAGAAGATGATCTCATTAAAAGGAAAGATTATGATTTTGAGGCGTTAATAAACACTGATTGGCCTGGCTCTAACTCAGATTATTTGCTTCTAAAGCCTTTTAGTGAAGAACAATGCAAACAATCATGTTTGGAAGATTGCTTGTGTGCAGGTATCAGTTTCCAAAAAGGGGATAGCTGCATGAAGAAGAAGTTCCCTCTTTCAAATGGCAGAGTTGATCCAGGACTAAATGGTGCTAAGACCTACATGAAAGTGAGGAAAGATAATTCATCTTTGTTTAATCCACCACTACCAGTCAATAAGAACAAGAATAGGAACACTTTGATCTTGGTTATTTCTGTGCTTTTTGGTACCTCAGCATTTCTCAATCTATTGTTTATTGGAGCCATGTGCATGGGCTTTTCCTTCATTTTTCAGTACAAGAAGAAGCTTGGAAGAAGTGACAATATTGCTGAGACTAATTTGCGTCATTTCAGTTACAAGGAGCTTGAAAAAGCTACCAATGGATTCAACAAAGAGCTAGGAAGGGGATCTTTTGGTGTTGTTTATGAAGGAGTGATCAACATAGGCTCATCAGCAACAACAGTGGCAGTAAAAAAGTTGAACAATATTTTGCAACAGGTTGAGAAGGAATTCAAGAATGAGTTATATGTCATTGGTCTCACACATCACAAGAACTTGGTCAGACTCATTGGATATTGTGAGGCTGCATCTGAAAGATTGCTGGTTTATGAGTACATGAGCAATGGCACTCTTGCAACTTTCCTTTTCAATGGGGAGAAACCAAGTTGGAAACTAAGGTTAGAAACTGCATTTGGGATTGCTAGAGGACTTGCTTATTTGCATGAAGAGTGCAGCACACAGATTATCCATTGTGACATAAAGCCTCAAAACATACTCCTTGATGACTACAATAATGCAAGAATTTCTGACTTTGGATTGGCCAAGCTTTTGAAGGTGAATCAGAGTAGAACCAACACTGCCATAAGGGGAACAAAGGGGTATGTTGCAGTTGAATGGTTTAAAAACATGCCTATCACTGCCAAAGTGGATGTATTTAGCTATGGTGTTTTGTTACTTGAGATTATTTGTTGTAGAAGAAATGTGGAAATGAAGGCAGAAGAAGAAGAGAGAGCAATTTTAACTGATTGGGCTTGTGATTGTTACATGGCAGGTGCTCTTGATGCCTTAGTTAAGGATGACATGGAGGCATTGGAGGACATAAGGAACTTGGAGAAGTTTGTAATGATTGCTATTTGGTGTGTTCAAGAGAATCCAGAACTTAGACCCACCATGAGAAAAGTGACACAAATGATTGAAGGTGCTGTTGAAGTGCAAGCTCCACCATATCCCTCGCCAATTAGTATTTCTTAG 2370 0.3992 MAQTRSNITIGPLVAESSNSSWVVSPLGDFAFGFLQLNDTENELFLLSIWYAKIPEKTIVWYANGDSPAPKGSKVELSASDGVVLTAPNGDQLWKTVNLTGKVASGFLNDTGNFVLKGGGGNGNFDIVWESFKDPRDTLLPTQILEMGGKLCSRFLESNFSEGRFELLLQSDGILSLHAINKPSEYVNENYYESYTGESDMSSPGIKLVFERSGYMYVLRKNNEKYNLSSSNEVSTKESYLRATLTFDGVFTFYQHPKSSIGGSDGWSPLWSLPDNICLTRLSSEGSGICGFNSICSLRDDKRPNCLCPKGYSLVDPNDPFGSCKPDFVQGCAEDDLIKRKDYDFEALINTDWPGSNSDYLLLKPFSEEQCKQSCLEDCLCAGISFQKGDSCMKKKFPLSNGRVDPGLNGAKTYMKVRKDNSSLFNPPLPVNKNKNRNTLILVISVLFGTSAFLNLLFIGAMCMGFSFIFQYKKKLGRSDNIAETNLRHFSYKELEKATNGFNKELGRGSFGVVYEGVINIGSSATTVAVKKLNNILQQVEKEFKNELYVIGLTHHKNLVRLIGYCEAASERLLVYEYMSNGTLATFLFNGEKPSWKLRLETAFGIARGLAYLHEECSTQIIHCDIKPQNILLDDYNNARISDFGLAKLLKVNQSRTNTAIRGTKGYVAVEWFKNMPITAKVDVFSYGVLLLEIICCRRNVEMKAEEEERAILTDWACDCYMAGALDALVKDDMEALEDIRNLEKFVMIAIWCVQENPELRPTMRKVTQMIEGAVEVQAPPYPSPISIS* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00586 789 SUPERFAMILY alpha-D-mannose-specific plant lectins 45 182 IPR036426 -
Rops6g00586 789 ProSitePatterns Protein kinases ATP-binding region signature. 506 532 IPR017441 GO:0005524
Rops6g00586 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Rops6g00586 789 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 2 133 - -
Rops6g00586 789 Gene3D Transferase(Phosphotransferase) domain 1 579 784 - -
Rops6g00586 789 Pfam D-mannose binding lectin 58 146 IPR001480 -
Rops6g00586 789 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 15 783 - -
Rops6g00586 789 Gene3D - 14 134 IPR036426 -
Rops6g00586 789 ProSiteProfiles Bulb-type lectin domain profile. 7 129 IPR001480 -
Rops6g00586 789 FunFam S-receptor-like serine/threonine-protein kinase 471 578 - -
Rops6g00586 789 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 779 - -
Rops6g00586 789 ProSiteProfiles Protein kinase domain profile. 500 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00586 789 SMART blect_4 14 135 IPR001480 -
Rops6g00586 789 Gene3D - 135 262 IPR036426 -
Rops6g00586 789 PIRSF SRK 1 789 IPR024171 GO:0004674
Rops6g00586 789 SMART serkin_6 500 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00586 789 SUPERFAMILY Protein kinase-like (PK-like) 483 771 IPR011009 -
Rops6g00586 789 CDD PAN_AP_plant 339 417 - -
Rops6g00586 789 Pfam Protein kinase domain 503 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00586 789 Gene3D Phosphorylase Kinase; domain 1 472 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00586 Rops-Chr6 15401523 15410232 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00586 442 776 Receptor kinase-like Gene Family AT5G45780 38.439 4.03e-69 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops6g00586 Pkinase 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00586 - - pvu:PHAVU_010G032000g 1125.92