Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00513 ATGTCATATGCAACAACAGATATGACTACCATTGATGAATTAAACAATGTCGACACATGTCCTGGAATTGATGATATTGGTAGTGGTGGCGAGGCATTGCATTGTGATGGTACAAGTGGAGACCCAGAAGTAGGGATATCGTTTACTTCTGAAGAAGACTTGAAATCATTTTATTCATCACATGCTTGTAGAAAGGGTTTTGGATGGAAGAGAAGGACTACCAAAAAGGCAGATGATGGGAAAATAAATTACATCATACTATCATGCTCAAGAGAGGGTAATCGTAAATCCTCCATATCAACTACATTGAAGACACTTCCAACAAAAGAAAAAAATTGTAAGGCCAAGTTAACTGCTAGGTTAGAAGAAGATGGACGATGGTACATACGGACGGTTATACATGACCACACTCACCAACTCAGTCCAAAAAAAGCCAGGTTGTTCACAGTGAACAAGAACATGGATATGCATGTGAGGAGAACAATTCAAATGAATGATGGTGCTGGGGTAAGGATTAACAAGACATTTCGGTCTCTTGTTGTAGATGCAGGCGGACACGAGAACTTATCATTTGTAGAAAAAGATATTCGAAATTATGTGTCTAAGGAAAGACATGCAATTGGAAATGAGGGTGATGGTAAAGCGTTGATAAGTTATTTTCATAGGATGCAAATGCAAAATAACAATTTCTTCTATGATATTGATTTGGATGATGAGTTTCGTGTGAAAAATGTATTTTGGGCAGATGCTAGGAGTATAGCCACATATGAATCATTTGGAGATGTTGTCACTTTTGACACCACATACTTGACAAACAAATATGACATGCCATTTGCTGCATTTGTTGGTGTCAATCACCACGGGCATTCACTGATTTGTTAG 882 0.3798 MSYATTDMTTIDELNNVDTCPGIDDIGSGGEALHCDGTSGDPEVGISFTSEEDLKSFYSSHACRKGFGWKRRTTKKADDGKINYIILSCSREGNRKSSISTTLKTLPTKEKNCKAKLTARLEEDGRWYIRTVIHDHTHQLSPKKARLFTVNKNMDMHVRRTIQMNDGAGVRINKTFRSLVVDAGGHENLSFVEKDIRNYVSKERHAIGNEGDGKALISYFHRMQMQNNNFFYDIDLDDEFRVKNVFWADARSIATYESFGDVVTFDTTYLTNKYDMPFAAFVGVNHHGHSLIC* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00513 293 PANTHER OS01G0519700 PROTEIN 40 268 - -
Rops6g00513 293 Pfam MULE transposase domain 262 293 IPR018289 -
Rops6g00513 293 Pfam FAR1 DNA-binding domain 56 141 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00513 Rops-Chr6 13647019 13647900 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops6g00513 FAR1 1.5e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00513 - - psat:127087122 370.548