Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00511 ATGTCTTCTAAGCTTCATCTGCCTTGTGATATTCCTTTGGGAATGGTTCTTCCAGGTCCATGTGTTAAGGATGCTTCTTGTAGTTCTTGTAGTATGTATCCAAATTCTGATGTGCTCTGTCATGGTTCTGGAAGTATTTGCTATTCATGTCAAACTGAGGTTCCATTAGCTGTGCCTTTGCTACCACCATCATCACAAGTTCCCAAGCAACAACAGGGAAGTTCAGCTGAAGATAAAGACTCGAAGGAATTGTTGGCATTTCTGATTGTTGGATCAGTTGGGGCTTTTGCAGTTGCCACAGCCACTAACAACTTCTCAGTGGATAATAAGATAGGTGCTGGTAGCTTTGGCAGTGTTTACAAAGGGAAGTTACCAGATGGTCGTGAAGTGGCCATTAAAAGAGGAGATACCAGCACTAAGAAGAAGAAATTCCAAGAGAAAGAAATTGCTTTTGATTCTGAATTGGCATTGTTGTCAAGGCTTCACCACAAGCATTTGGTGAGGCTAATTGGGTTTAGGGTGGAGAATGATGAGAAGGTTTTGGTTTATGAGTACATGAGCAATGGATCACTCCATGATCATTTGCATGACAAGAATAATATTGACAAAAGTAGCAGCATTTTGAATTCTTGGAAGATGAGAATCAAAATTGCATTAGATGCTGCTAGGGGAATTGAGTACATTCAGAACTGTGCAGTGCCACCCATTATTCACAGAGATATCAAGTCCTCAAATATACTTTTAGAATCAGATTTGAATGCTAGAGTTTCTGATGCAATGTCATCTCCTATACACACACAGACCTGA 807 0.4027 MSSKLHLPCDIPLGMVLPGPCVKDASCSSCSMYPNSDVLCHGSGSICYSCQTEVPLAVPLLPPSSQVPKQQQGSSAEDKDSKELLAFLIVGSVGAFAVATATNNFSVDNKIGAGSFGSVYKGKLPDGREVAIKRGDTSTKKKKFQEKEIAFDSELALLSRLHHKHLVRLIGFRVENDEKVLVYEYMSNGSLHDHLHDKNNIDKSSSILNSWKMRIKIALDAARGIEYIQNCAVPPIIHRDIKSSNILLESDLNARVSDAMSSPIHTQT* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00511 268 Pfam Protein kinase domain 106 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00511 268 SMART serkin_6 105 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00511 268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Rops6g00511 268 ProSiteProfiles Protein kinase domain profile. 105 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00511 268 SUPERFAMILY Protein kinase-like (PK-like) 97 258 IPR011009 -
Rops6g00511 268 ProSitePatterns Protein kinases ATP-binding region signature. 111 133 IPR017441 GO:0005524
Rops6g00511 268 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 20 262 IPR044815 GO:0004674
Rops6g00511 268 Gene3D Phosphorylase Kinase; domain 1 70 185 - -
Rops6g00511 268 Gene3D Transferase(Phosphotransferase) domain 1 186 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00511 Rops-Chr6 13617318 13618234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00511 11 97 Receptor kinase-like Gene Family AT3G55950 44.681 2.24e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Rops6g00511 Pkinase 2.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00511 - - gmx:100802403 278.485