Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00491 ATGGGGATGGCTGCAGAGTCACAGTTTCATGTTTTAGCAGTTGATGACAGCCTTATAGATAGAAAGTTGATTGAAAGACTGCTCAGGACCTCTTCATATCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTGGAGTTTTTAGGCTTGTATGGGAATGAACAAAGCAATCCAAATACACCATATGTTTCTCCCAATAATCATCAGGAAGTGGAGGTGAATCTTGTTATAACAGACTACTGTATGCCTGGCATGACAGGCTATGATTTACTCAAGAAAATCAAGGAATCTTCATCTTTGAGAAACATACCAGTGGTAATTATGTCATCTGAAAATGTGCCTTCAAGGATTAGCAGATGCCTGGAGGAAGGTGCAGAGGAGTTTTTCTTGAAGCCAGTGAGGCCATCAGATTTGAATAGGCTAAAACCCCATATGATGAAGGCCAAGTTGAAAGATCAAAAGCAAGAAACCCAGGAAAAGCATGAAAACTCAGAAACTCAACAGCAAAGAAGCACATACACTGGCACGGATACCGGACATGACACGGACACTCAGACACACATGATGTCTAAAATATAG 579 0.4093 MGMAAESQFHVLAVDDSLIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLYGNEQSNPNTPYVSPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRPSDLNRLKPHMMKAKLKDQKQETQEKHENSETQQQRSTYTGTDTGHDTDTQTHMMSKI* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00491 192 CDD REC_typeA_ARR 11 141 - -
Rops6g00491 192 Pfam Response regulator receiver domain 11 139 IPR001789 GO:0000160
Rops6g00491 192 SUPERFAMILY CheY-like 8 149 IPR011006 -
Rops6g00491 192 MobiDBLite consensus disorder prediction 167 192 - -
Rops6g00491 192 Gene3D - 10 189 - -
Rops6g00491 192 SMART REC_2 9 142 IPR001789 GO:0000160
Rops6g00491 192 Coils Coil 147 167 - -
Rops6g00491 192 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Rops6g00491 192 MobiDBLite consensus disorder prediction 147 192 - -
Rops6g00491 192 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 170 IPR045279 GO:0009736
Rops6g00491 192 MobiDBLite consensus disorder prediction 147 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00491 Rops-Chr6 13159845 13162397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00491 1 163 Response Regulator Gene Family AT3G57040 79.042 1.32e-90 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops6g00491 Response_reg 3.9e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00491 K14492 - gmx:100814494 293.508