Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00475 ATGGTTGGTAACAAAAACAGCAACAAGGAGCACGAGAGAGACCCTGAGTTTATATTTAACGAGGATGTCTATGAAGGTGATCAACAGGAAATTGAAGCCGTGAAGTACGAGAGTGAGAGTGAGAGTAACAGTGAAAGTGAAAGTGGCAGTGATGATAATAGAAATCACACAACACAGCCTGAATCTTTCACTTCTCAGCAATGGCCTCAAAGTTACAAAGAGACTACAGATTCTTACACAATTGCTACAGCTCCAAATTTTGGATCATTTCTGCGGGCACCAAGTTTTCTTTATTCCAGTTTTAGCAATCGTTCGAAGAGTAACTTAGACATAGATGGAAAGACTCCTTTTCTATCAGGTCAGGAAGACATTACTCAATCTACATGGTGGGAGAAAGGTTCTGTGCAAAGACATTTGACTGGAGAATTGCCCATTCGTTATGGATGCAGCCTCACTCAAACAGTTATCAATGGGGTTAATGTGATGGCTGGAGTTGGCCTTCTATCTACACCTTATACAGTGAAACAAGCTGGATGGATGAGCATGGTGCTGATGGTGCTTTTTGCAGTTATTTGTTGTTATACAGCCACCCTTATGAGATACTGCTTTGAAAGCAAAGAAGGAATCACTAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAGATATGGCCGTATTTTTGTATCAATCATTTTGTACACCGAATTATATTCATATTGTGTGGAATTCATCACCTTGGAAGGAGATAACCTCACTAGTCTGTTTCCTGGAACATCCTTAGATTTGGGTAGTTTACAGTTAGACTCCATGCACTTGTTTGGAATTTTGACTGCACTTATTATTCTCCCTACTGTTTGGTTGAAGGATCTTCGAATAATCTCTTATCTATCAGCTGGAGGGATTGCTGCAACAGTATTGATTACTATCTGTGTGTTTTCTGTTGGGACAACTGTTGGATTCCATCAAACTGGTCCATTGGTAAATTGGAGTGGCATTCCATTTTCTATTGGGGTATATGGCTTTTGCTTTGCAGGACATTCAGTTTTTCCAAATATATACCAGTCTATGGCTGACAAAAAACAGTTTACTAAAGCATTAATAACATGTTTTATTTTGTGTGTTTTGATGTATGGAGGCGTTGCAGTCATGGGATTTCTCACCTTCGGTGATGGCACTTTGTCTCAGATAACTTTGAATATGCCACCAGGTGCAGTTGCTTCCAAAGTTGCATTGTGGACAACAGTAATTAACCCATTCACTAAATATCCTTTTGTCACAGATTAG 1284 0.3964 MVGNKNSNKEHERDPEFIFNEDVYEGDQQEIEAVKYESESESNSESESGSDDNRNHTTQPESFTSQQWPQSYKETTDSYTIATAPNFGSFLRAPSFLYSSFSNRSKSNLDIDGKTPFLSGQEDITQSTWWEKGSVQRHLTGELPIRYGCSLTQTVINGVNVMAGVGLLSTPYTVKQAGWMSMVLMVLFAVICCYTATLMRYCFESKEGITSYPDIGEAAFGRYGRIFVSIILYTELYSYCVEFITLEGDNLTSLFPGTSLDLGSLQLDSMHLFGILTALIILPTVWLKDLRIISYLSAGGIAATVLITICVFSVGTTVGFHQTGPLVNWSGIPFSIGVYGFCFAGHSVFPNIYQSMADKKQFTKALITCFILCVLMYGGVAVMGFLTFGDGTLSQITLNMPPGAVASKVALWTTVINPFTKYPFVTD* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00475 427 MobiDBLite consensus disorder prediction 55 71 - -
Rops6g00475 427 MobiDBLite consensus disorder prediction 1 20 - -
Rops6g00475 427 Gene3D Amino acid/polyamine transporter I 148 420 - -
Rops6g00475 427 PANTHER OS05G0424000 PROTEIN-RELATED 154 417 - -
Rops6g00475 427 Pfam Transmembrane amino acid transporter protein 150 424 IPR013057 -
Rops6g00475 427 MobiDBLite consensus disorder prediction 28 54 - -
Rops6g00475 427 MobiDBLite consensus disorder prediction 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00475 Rops-Chr6 12753051 12758034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00475 4 427 Amino Acid or Auxin Permease AAAP Family AT2G41190 61.785 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00475 K15015 - gmx:100790344 674.085