Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00463 ATGCATCCATGCAACCAACTAACCTACCCTTCATGGCATCGTGATGGCACACCCGAGGAGATTCAAAGCTTCAAACAAGCTTCCGTGAGAGAGGTAGGAAGAAACCATTATTCCCACTTTGATGAGCTTGACGATGAAGCCATGGTTATGGAGATTGCAAAGCTTCAAGGAATGAGTAGAAGGTTAAAGACCACGCCAACTCGTGACCATGCATGCATGCGCGTAGAGGCTGGATCATCAGCTGATGAAGCTGAGCATGGCCTGGCATGTGCAAACTATCCATGGCCTCACGAGGGCATCCTCAGTTCATATGATCATGCTTCGTTTCGTCGTGGTCATCAAGTTTATCAACAAGTCTGTGCTTCCTGTCATTCTATGTCTTTGATATCATACCGTGGTTTGGTTGGTGTGGCTTATACAGAAGAGGAGGTAAAGGCTATGGCAGCTGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGTTGAGATGTTTACGCGTCCTGGTAAACTCAGTGATCGCTTTCCTCAGCCATATGCAAATGAATCAGCTGCTAGGTTTGCCAATGGAGGAGCCTATCCTCCAGATCTAAGCCTTATTACCAAAGCTCGTCACAATGGTCAGAACTATGTGTTCGCCCTTCTAACTGGTTATCGTGATCCCCCTGCTGGTGTTTCGATTAGAGATGGACTACACTATAATCCTTATTTTCCTGGTGGGGCCATTGCCATGCCTCAAATGCTTAATGAGGGTGCTGTTGAATATGAAGATGGTGAAGTGCTGGCCACATAG 789 0.4689 MHPCNQLTYPSWHRDGTPEEIQSFKQASVREVGRNHYSHFDELDDEAMVMEIAKLQGMSRRLKTTPTRDHACMRVEAGSSADEAEHGLACANYPWPHEGILSSYDHASFRRGHQVYQQVCASCHSMSLISYRGLVGVAYTEEEVKAMAAEIEVVDGPNDEVEMFTRPGKLSDRFPQPYANESAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIRDGLHYNPYFPGGAIAMPQMLNEGAVEYEDGEVLAT* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00463 262 PANTHER CYTOCHROME C1 73 258 IPR002326 GO:0009055|GO:0020037
Rops6g00463 262 Pfam Cytochrome C1 family 95 258 IPR002326 GO:0009055|GO:0020037
Rops6g00463 262 FunFam Cytochrome c1, heme protein 84 262 - -
Rops6g00463 262 PRINTS Cytochrome C1 signature 93 112 IPR002326 GO:0009055|GO:0020037
Rops6g00463 262 PRINTS Cytochrome C1 signature 158 178 IPR002326 GO:0009055|GO:0020037
Rops6g00463 262 PRINTS Cytochrome C1 signature 229 240 IPR002326 GO:0009055|GO:0020037
Rops6g00463 262 PRINTS Cytochrome C1 signature 113 132 IPR002326 GO:0009055|GO:0020037
Rops6g00463 262 PRINTS Cytochrome C1 signature 191 215 IPR002326 GO:0009055|GO:0020037
Rops6g00463 262 PRINTS Cytochrome C1 signature 240 259 IPR002326 GO:0009055|GO:0020037
Rops6g00463 262 Gene3D - 84 261 IPR036909 GO:0009055|GO:0020037
Rops6g00463 262 SUPERFAMILY Cytochrome c 88 258 IPR036909 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00463 Rops-Chr6 12449204 12450350 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00463 79 257 Chloroplast and Mitochondria Gene Families AT5G40810 91.061 2.09e-113 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00463 K00413 - thj:104805337 355.14