Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00445 ATGGCTCATGTGTGGTTGTTTCATGTGCAAACAGCCTTTGGGTATACTCACCATGTAAGTTGCACCCCTAGGATGAACAAGCTCGGGGTCATGGAGGTGGCCATCATCATCACTCACAAACTCCACTTCTTACCATGGCTGCACCCTTGTGGCCTTCACACTCTGAATACCGTTTGGGCTCCGCATTTAAGTGAGGAAGTCATGTTGAAGGGGTGTTGTGTTGGACCGAGTAAGCAAGTTATGAAGCACAAGTTGAGCTACACCACAATGATGGTTGGATTGAGCTTCGGGAATTCAAATGTACCCATGGCCACGGCGGTTTTCAAGAAGCCAGGCTTTGCATGGGAGCCTATCACACTGAAAACATTTCTAAGAAGATTCTCTAGAGTTGCTCAAAAGAGTGTTAATACTTCTGACCTGCAATTTGAGTTCCTAAGCTGCTACCTCGCTGAGCTCAGTTTGCTGGATTATAATTGTGTCAAGTTCTTGCCTTCTTTGGTGGCCGCATCTGTTGTGTTTCTAGCAAGATTTATTTTAAGCCCAAAGACACATCCTTGGAATTCAGCACTCCATCAACTCACCAGATATAAACCTGCTGACTTGAAGGAATGCGTTCTAAACATACATGACTTGTATCTCGGTAGGAGAGGGGGTTCTTTGCAAGCTGTGAGAGAGAAATACAAACAGCATAAGTTCAAATGCGTGGCAACAACACCCTCTCCTCCTGAGATACCTCTTTCTTTTTTCGAATTTAGAGGGACAGAACCTTATGCAATTGTGGCTCGGTTTTTTTTTTCTGCCATGGCTTTGGTGTCAACTATTGGCAGAGGCATGAGAAAAGGGTTTCCTAACACAAGAAGATTGAGGTGA 870 0.4471 MAHVWLFHVQTAFGYTHHVSCTPRMNKLGVMEVAIIITHKLHFLPWLHPCGLHTLNTVWAPHLSEEVMLKGCCVGPSKQVMKHKLSYTTMMVGLSFGNSNVPMATAVFKKPGFAWEPITLKTFLRRFSRVAQKSVNTSDLQFEFLSCYLAELSLLDYNCVKFLPSLVAASVVFLARFILSPKTHPWNSALHQLTRYKPADLKECVLNIHDLYLGRRGGSLQAVREKYKQHKFKCVATTPSPPEIPLSFFEFRGTEPYAIVARFFFSAMALVSTIGRGMRKGFPNTRRLR* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00445 289 FunFam Cyclin A1 109 237 - -
Rops6g00445 289 Coils Coil 287 289 - -
Rops6g00445 289 SMART cyclin_7 122 210 IPR013763 -
Rops6g00445 289 SUPERFAMILY Cyclin-like 119 243 IPR036915 -
Rops6g00445 289 CDD CYCLIN_AtCycA-like_rpt2 119 232 - -
Rops6g00445 289 Pfam Cyclin, C-terminal domain 119 240 IPR004367 -
Rops6g00445 289 Gene3D - 106 245 - -
Rops6g00445 289 SMART Cyclin_C_2 118 241 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00445 Rops-Chr6 12122493 12123475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00445 119 250 Core Cell Cycle Gene Families AT1G47230 68.182 2.22e-62 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00445 K06627 - gmx:100801988 256.144